Streptomyces janthinus: RI060_30175
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Entry
RI060_30175 CDS
T09385
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
sjn
Streptomyces janthinus
Pathway
sjn00860
Porphyrin metabolism
sjn01100
Metabolic pathways
sjn01240
Biosynthesis of cofactors
sjn03030
DNA replication
Module
sjn_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RI060_30175
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RI060_30175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjn03032
]
RI060_30175
Enzymes [BR:
sjn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
RI060_30175
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
RI060_30175
DNA replication proteins [BR:
sjn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
RI060_30175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
WND23919
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Position
6594203..6595405
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AA seq
400 aa
AA seq
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MREFIVEADGGSRGNPGPAGYGAVVSDAATGETLREAAEYIGVATNNVAEYRGLLAGLRA
AHELDPAATVHVRMDSKLVVEQMSGRWKIKHPDMKPLAAEAARVFPPGRVTYEWIPRERN
KHADRLANEAMDAGARGEQWSESASTAELDTAAGAAETGGLSDAPGVVGSAGADADTRAA
KAVATPGWAPADMGAPATFVLLRHGETPLTPQKRFSGSGGTDPSLSDVGREQAERAAALL
AMRGTIQAVVSSPLTRTRETAGIVAARLGLDVSVDDGLRETDFGAWEGLTFAEVRERHPD
DLNAWLASPDAEPTGGGESFAATGIRIAATRDKLVAAYAGRTVLLVTHVTPIKTLVRLAL
GAPPESLFRMELSAASLSVVAYYADGNASVRLLNDTSHLR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggagttcatcgtcgaggccgacggcgggtcgcggggcaacccggggcccgcgggc
tacggggccgtggtgagcgacgcggcgacgggggagaccctgcgggaggcggccgagtac
atcggcgtcgccacgaacaacgtcgccgagtaccggggcctcctcgccggcctgcgcgcc
gcccatgaactggacccggccgcgacggtccacgtccggatggactccaagctcgtcgtc
gagcagatgtcgggccgctggaagatcaagcaccccgacatgaagcccctggcggcagag
gcggcacgggtgttcccgccgggccgggtcacgtacgagtggatcccgagggagcggaac
aagcacgcggaccgactggccaacgaggctatggatgccggggccaggggagaacagtgg
tcggagtccgcgtcgacggctgagctggacacggctgcaggggctgctgagaccggtgga
ctctctgacgctcctggtgtcgtcgggtcagccggagccgatgccgacacgcgtgccgcc
aaggccgttgccacgcccggctgggcgcccgccgacatgggcgccccagccaccttcgta
ctcctgcgccacggcgagacccccctcaccccgcagaagcgcttctccggcagcggcggt
accgacccctccctctccgacgtgggccgggaacaggccgagcgcgccgccgccctgctg
gccatgcgcggcacgatccaggccgtcgtctcgtcgcccctcacccggacgcgggagacc
gccggtatcgtcgccgcccggctcgggctcgacgtgagtgtcgacgacgggttgcgcgag
accgacttcggcgcctgggagggactcaccttcgccgaggtgcgcgagcgccaccccgac
gacctgaacgcctggctggcctccccggacgccgaacccaccggcggcggcgagagcttc
gcggccacgggcatccggatcgccgccacccgcgacaagctggtcgcggcgtacgcgggc
cgcacggtcctgctcgtcacccacgtgaccccgatcaagacgctcgtccggctcgccctc
ggcgccccgcccgagtccctgttccgcatggaactctcggccgcgtccctgtcggtcgtg
gcgtactacgcggacggcaacgccagcgtccgcctcctcaacgacacgtcccacctgcgc
tga
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