KEGG   Scomber japonicus (chub mackerel): 128353109
Entry
128353109         CDS       T09718                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04510  Focal adhesion
sjo04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128353109 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128353109 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C EGF_Teneurin BLOC1_2 DUF4443
Other DBs
NCBI-GeneID: 128353109
NCBI-ProteinID: XP_053169771
LinkDB
Position
23:complement(20077164..20116646)
AA seq 1803 aa
MRFRDWLQDPLTQPQQAVNALRLEMSLLIHILATLALWCPVRALLPEFGDVCTEGSCYPA
TGDLLIGRAHKLVASSTCGLERPERFCIVGHLEEEKKCFVCDSRRMFDEQNNHSHTIENV
VTTFAANRLKTWWQSESGVENVTVQLDLEAEFHFTHLIMTFKTFRPASMVIERSMDFGRT
WQVYRYFAYDCEASFPGVSTGPMVKVDDIMCDSRYSDIEPSAEGEVIFRVLDPAFEIEDP
YSLRIQNLLKITNIRVKFIKLHTLGDNLLDSRDEVTEKYYYALYDMVVRGNCFCYGHASE
CAPMDGAPLGYEGMVHGRCVCNHNTEGLNCERCQDFYQDLPWRPAEGRNTHSCKKCECNH
HSTSCHFDLAVYMSTGNVSGGVCDDCQHNTIGRQCEQCGPFFYQHPNRDLRDPSVCEPCN
CDPAGSQRGGICDARTDVAAGLISGQCRCKDNVEGERCDHCRQGHYGLGEGPQGCLPCTC
NPLGTLPGGNSCDSGTGRCFCKRLVDGHNCDECRPQHWGLSNDMDGCRPCDCDQGGAVNN
NCDPHSGQCVCRERMFGRRCDQVESGFYFITLDHYTYEAEDAKHGPGVTVVPRPYPLDRS
PTWTGMGFVNVPEGAYLEFTISNIPESMDYDMLIRYEPQLPEQWEQVKVQVERPLVDPPN
YSSHCGNAIQSGDEQSVSLPPGSRHVLLVRPVCFEKGLNYTVRLSLPLYSSVSDHQSPYT
LIDSLVLMPRIRELDMFHGIEGEGAWDTFQRYRCLETSQSVVKSPLTDICNDYIFSVSAL
LHKGAMACQCDPQGSLSTICESSGGQCQCRPNVVGRNCDHCAPATFLFSPAGCRHCDCDP
RGAVNSFCHEATGQCDCVTGATGRQCAHCLPGFWGFPQCRPCHCNGHSEYCHPQTGECQG
CRDFTTGHHCERCLDGYHGDPELGSDSHCRPCMCPDGPRSGRQFSDSCYLLGNTNQLVCV
CSPGYKGARCDECSPGYFGNPLVPGGRCTPCQCNNNIDMHDPRSCDARTGACLACLYHTE
GYACQHCKLGYYGNAAAQSCRKCMCYSMGTVRQACSSPDECQCDRYSGQCHCQPNVVGQN
CDRCAPDTWNIASGTGCQRCDCDPVHSFGSSCDVVTGHCMCKPGFGGKTCRECKELFWGD
PEVKCHACDCDPRGISSQQCHPATGQCTCKEGMSGMRCDKCARGYHGEFPACEPCHQCFS
IWDTVVGELKNQTERLEAKVTELQTTGVTAPYKDLVNSLERNAKAVRDIVESNPAAMKLE
QIQELMHQITGVMSYLNGKLNTTEEALNLLHKDSNATDANLDEMMEEAKQLEQNVQEMRQ
QVFNAKNANLQGAMDTIAAAHAQSVTAELRANLSTSNPGNLVSQSAEVRKATEDKLSKSQ
KEFDRKHQRHNQKLDKLGNELDKFNLTPLSEKTCGAAADDESCSSSLCGGLGCVGEDGAP
KCGGEGCSGIVTTSETALKSAKDLDQEILSAMQEVDKLSRMVWEASTRANEAKANAQEVL
IKSNRSKERVEQSNEQLRDLIKEIRDLLTNDKANVSVIEAVANEVLALEMPTSTEKLQEL
TKEIREKVSTLTSVETILIQSADDIHAAETLLKQAKAASEQASNMKDTADIVMAALNETE
RAQSIAMDAIEMALNNTRGTQDLLVSVESETAESELKLSNTTGRLLMLEREVGLLRQNNL
EVDRLAETADSITEHAKQNADEAQQEFDAEVKDKLQEVEDLVEDKGYSVLKARKRAEELQ
QEAKELLAQSSDKLQRLGDLESSYEANQRILEAKAAELVELEEMVSKILGEISHKVTLYS
TCL
NT seq 5412 nt   +upstreamnt  +downstreamnt
atgagattcagagattggctacaggacccattgacgcaaccccaacaagctgtcaatgct
ctgcgcctggagatgtcgcttttaatccacattttagcaactttggccttgtggtgtccc
gttagggctctgctgccggagtttggggatgtttgcacggaaggcagctgctatcccgcc
acaggtgacctgctgataggccgcgcgcacaaactcgtcgcctcctccacctgtggcctg
gagcggccggagcgcttctgcattgtcggacatctggaggaggagaagaaatgtttcgtg
tgcgactcccggcggatgttcgacgagcaaaacaaccacagccacaccatcgagaacgtg
gtcaccaccttcgccgccaaccgcctcaagacatggtggcagtcggagagtggtgtggag
aatgtgaccgtccagctggacctagaggccgagtttcatttcactcatcttatcatgact
ttcaagacgttccggccggcttccatggtgatcgagcggtcgatggacttcgggaggacg
tggcaggtttaccgttacttcgcttacgactgcgaggcctctttccccggtgtgtcgacg
ggtccgatggtcaaagtggacgacatcatgtgtgactcacgatactcggacatcgaaccg
tctgcagagggagaggtgatatttcgggtgctggaccccgcctttgagattgaggaccca
tacagcctgaggatacagaacttgctgaagatcacaaacatcagagtcaagttcatcaag
ctccacacgctgggcgacaacctgctcgactcccgcgacgaggtgacggagaagtactac
tacgccctttatgatatggtcgtccgtggcaactgcttctgctacggccacgcctccgag
tgcgccccaatggatggagcacccttaggatacgagggaatggtccatggccgctgtgtg
tgtaatcacaacaccgaaggacttaactgtgaacgctgtcaagacttttaccaggattta
ccctggagacctgcggagggacgaaacacccactcctgcaagaagtgcgagtgtaaccat
cactccacctcgtgtcacttcgacctggccgtgtacatgagcaccgggaacgtgagcgga
ggcgtgtgcgacgactgccagcacaacaccataggccgacagtgcgagcagtgcggccct
ttcttctaccagcaccctaaccgagacctgagggaccccagcgtctgcgaaccgtgtaac
tgtgacccagccgggtctcagcggggggggatatgtgatgcgaggacggacgtggcagcc
gggctgatttcaggccagtgtcggtgcaaagacaacgtggagggagagcgctgcgaccac
tgcagacagggacactacggactgggagagggaccacaaggatgcctaccttgtacctgt
aacccgttgggcacgctgcctggaggaaactcctgtgattcaggcacaggaaggtgcttc
tgcaaacggctggtggacggacataactgcgatgagtgtcggccgcagcactggggtctc
tccaatgacatggatggctgcagaccatgtgactgcgaccagggcggggcggtcaacaat
aactgtgaccctcactcaggacagtgtgtgtgcagggagcgcatgtttggacgacgttgc
gaccaagtcgagtccggcttctacttcatcactctggaccactacacctacgaggccgag
gacgccaagcacggacccggtgtgacggtggtgccgaggccttatcctctggatcggagt
ccgacgtggactggtatgggcttcgttaacgtgccagaaggagcctacttagagttcacc
atcagtaacatccctgagtccatggactatgacatgcttattcgttacgagccgcagctt
cctgagcagtgggagcaggtgaaggtccaagtggagcgtcccctcgttgaccctccgaac
tactccagtcactgtggcaacgccatccagagcggagacgagcagtccgtctctcttcca
cctggatccagacatgtgctgctggtgaggccggtgtgctttgagaaagggctgaactac
acggtgcgtctcagcctgccgctctactcgtctgtcagcgaccaccagagcccgtacaca
ctcatcgactctttggtgctgatgccacggatcagggagctggacatgttccacgggatc
gaaggtgaaggagcgtgggatacgttccagcgctaccgatgtctggagacgagccagagc
gtcgtcaagagccccttgaccgacatctgtaacgactacatcttcagcgtctccgctctg
ctgcacaaaggagccatggcatgtcagtgtgaccctcagggttcactcagcaccatctgt
gagtccagcggagggcagtgtcagtgtcgacccaacgtggtcggcaggaactgcgaccac
tgcgccccggcaacgttcctgttcagccccgccggctgcagacattgtgactgtgatcct
cgaggtgctgtcaactccttctgccacgaggcgaccggtcagtgcgactgcgttaccggg
gcaaccgggcgtcagtgtgcccactgcctgccgggcttctggggcttccctcagtgccga
ccgtgccactgtaacggccacagcgagtactgccaccctcagaccggagagtgccaaggc
tgccgagacttcaccaccggacaccactgtgaaaggtgtctggatggttaccatggtgac
cctgagttgggttcggacagccactgccgcccctgcatgtgccccgacggcccgcgcagt
ggacgccagttttcggacagctgctatctcctgggtaacacaaaccagctggtgtgtgtg
tgcagccctggatacaaaggcgccaggtgtgacgagtgctctcccggttacttcgggaac
cctctggtgcccggcgggcgctgcacaccctgccagtgtaacaacaacatcgacatgcac
gacccgaggtcctgcgatgctcggacgggtgcgtgcctcgcctgcctgtatcacacagag
ggctacgcctgccagcactgcaaactgggttactacggcaacgctgccgcacagagctgc
aggaagtgtatgtgttactcgatgggcacggtgcgtcaggcctgctcctccccagacgaa
tgtcagtgtgaccggtacagcggccagtgtcactgccagcccaacgtggtcggccagaac
tgcgaccgctgcgcccccgatacgtggaacatcgccagcgggacgggctgccagcgctgc
gactgcgacccggtccactccttcggatcctcctgcgatgtggttacaggacattgcatg
tgcaaacctggttttggtggcaagacatgtcgggagtgcaaagagctcttctggggggat
ccagaggttaaatgtcacgcttgtgactgcgatcctcggggaatctccagccagcagtgc
catcctgccaccggacagtgtacctgcaaggagggcatgtccggcatgcgctgcgacaaa
tgcgcccggggttaccatggcgaattccctgcctgcgaaccctgccaccagtgcttctcc
atctgggacactgtggtgggcgagctgaaaaaccaaacagagcgtctggaggccaaagtg
accgagctgcagaccactggggtgacggcgccgtataaagatttagtcaacagcctggag
aggaacgccaaagctgtgagagacatagtagagagcaaccctgcagccatgaagctggag
cagatacaggagctgatgcatcagattacgggtgtgatgtcatacctgaacggaaagctg
aacacgaccgaggaggcgctgaaccttctccacaaggactcgaacgccaccgatgctaac
ttggatgaaatgatggaggaggcgaagcagctggagcagaacgtccaggagatgagacag
caggtgttcaacgccaagaacgccaacctccagggcgccatggataccatcgcagcagca
cacgcacagtccgtgacggcagagctccgcgccaacctctccaccagtaatcccggcaac
ttggtttctcagtcggccgaggtacggaaagccacggaggacaaactgagcaagagtcag
aaggagtttgaccgcaagcaccaaagacacaatcagaaactcgacaagctgggcaacgag
ctggataaattcaacctgacgcctctgagcgagaagacatgcggtgctgcagctgatgat
gagagctgctccagttccctctgcggtgggttgggatgcgtcggcgaggacggagcacct
aagtgtggaggagaaggctgcagcggcatcgtcacaacctccgaaactgctttaaaatca
gccaaagatctggaccaggagatcctctcagcgatgcaggaggtggataaactctccagg
atggtgtgggaagcatccacccgcgccaacgaggccaaggccaacgctcaggaggtgctg
atcaaatccaaccggagcaaagagagagtggagcagagcaacgagcagctccgtgacctc
atcaaagagatacgagacctgctcaccaacgataaggccaacgtgtccgtgatcgaggcg
gtggccaacgaggtgctggctctggagatgccgacctcgacggagaagctgcaggagctg
acgaaggagatcagggagaaagtcagcactctgaccagcgtggagacgatcctcattcag
agcgctgacgacatccacgctgcagagacgctgctcaaacaggccaaagctgccagcgag
caggcgtccaacatgaaggacacagcggacatcgtgatggcggccctgaatgagacggag
cgagctcagagtatcgccatggacgctatcgagatggccctgaacaacacgagaggcacg
caggacctgctggtgtctgtggagtcagagacggccgagtcggagctgaagctgagtaac
accactggtcgcctgctcatgctggagcgggaggtcggcctgctgagacagaacaacctg
gaggtggaccggctggcggagacggccgactcgatcacggagcacgccaagcagaacgca
gacgaggcgcagcaggagtttgacgcggaggtgaaagataaattgcaggaggtggaggac
ctggtggaggataaagggtattcggtgctgaaggcgaggaagagagcggaggagctgcag
caggaagccaaagagctgctggctcagagtagcgacaagctgcagagactcggagattta
gagagctcctacgaggccaaccagcgcatcctggaggccaaagctgccgagctggtcgag
ctggaggaaatggttagtaagatcctgggagagatcagccacaaagtgacgctgtacagc
acctgtctgtga

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