| Entry | T09718 |
| Org code | sjo |
| Name | Scomber japonicus (chub mackerel) |
| Annotation | yes |
| Taxonomy | TAX: 13676 |
| Lineage | Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Scombridae; Scombrinae; Scombrini; Scomber |
| Org group | Animals; Fishes; Scombriformes |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: animals [BR:br08612] |
| Data source | RefSeq Assembly: GCF_027409825.1 (Chromosome)
BioProject: 928096 |
| Chromosome | 1 (RS: NC_070578)
2 (RS: NC_070579)
3 (RS: NC_070580)
4 (RS: NC_070581)
5 (RS: NC_070582)
6 (RS: NC_070583)
7 (RS: NC_070584)
8 (RS: NC_070585)
9 (RS: NC_070586)
10 (RS: NC_070587)
11 (RS: NC_070588)
12 (RS: NC_070589)
13 (RS: NC_070590)
14 (RS: NC_070591)
15 (RS: NC_070592)
16 (RS: NC_070593)
17 (RS: NC_070594)
18 (RS: NC_070595)
19 (RS: NC_070596)
20 (RS: NC_070597)
21 (RS: NC_070598)
22 (RS: NC_070599)
23 (RS: NC_070600)
24 (RS: NC_070601) |
| Statistics | Number of protein genes: 23586
Number of RNA genes: 2724
|
| Created | 2024 |
| Reference | PMID: 38066002 |
| Authors | Lee YH, Abueg L, Kim JK, Kim YW, Fedrigo O, Balacco J, Formenti G, Howe K, Tracey A, Wood J, et al. |
| Title | Chromosome-level genome assembly of chub mackerel (Scomber japonicus) from the Indo-Pacific Ocean. |
| Journal | Sci Data 10:880 (2023)
DOI: 10.1038/s41597-023-02782-z |
| Reference | PMID: 20035845 |
| Authors | Catanese G, Manchado M, Infante C |
| Title | Evolutionary relatedness of mackerels of the genus Scomber based on complete mitochondrial genomes: strong support to the recognition of Atlantic Scomber colias and Pacific Scomber japonicus as distinct species. |
| Journal | Gene 452:35-43 (2010)
DOI: 10.1016/j.gene.2009.12.004 |
Scomber japonicus (chub mackerel)