Scomber japonicus (chub mackerel): 128353140
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Entry
128353140 CDS
T09718
Symbol
shank3b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
sjo
Scomber japonicus (chub mackerel)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SH3_2
SAM_2
PDZ_6
PDZ
SH3_9
Ank_2
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
128353140
NCBI-ProteinID:
XP_053169798
LinkDB
All DBs
Position
23:complement(23702780..23746621)
Genome browser
AA seq
1509 aa
AA seq
DB search
MPLSPAADTKHDRPRQQAVTNGNPTGSAVARDDDAEDTPLGSDIVVRIGIPDLQQTKCLR
LDPELPVWTSKQRVLVTLTQSLSDVLNYGLFQPAFNGRAGKFLDEERLLKEYPLPPITPI
PYLEFRYKRRIYTQSYVDDKQLAKLHTKANLKRFMEHVHQKNVEKVSKWLEKGLDPNFHD
SDTGECPLTLAVQLEESCELIKVLRSGGAHLDFRTRDGITALHRAVLCRNSAALTVRTFS
PSGGGHVENSPPPSPPLTPQMRKRRLYSAVPGRTFIATRSHVPQGNGEIQLHRGERVKVL
SIGEGGFWEGTVKGRTGWFPAECVEEVQMRQYDPRLETREDRTKRLFRHYTVGSYDNYTS
YSDYVIEEKTAVLQKRESEGFGFVLRGAKAETPIEEFAPTPAFPALQYLESVDQGGVAWR
AGLRTGDFLIEVNGTDVVKVGHRQVVSLIRQGGSRLLMKVVSVSRKSESNLIRKKAPPPP
KRAPSTSLTLRSKSMTADLEDIEKLDEMLAGNQQEVVLRARPSDDFRAATVKQRPTSRRI
TQAEINSLFERQGLVPPSAPEKSTMALPRGMSRTKSFGTPEDDRISALINESRFPRSSSL
TDSFIPPPPQTAPPPPPSASASTSPLFLLDSGPPPSFLPPPPPARGEGLTRSSFKPGAEP
RLQELMDSPTRSHAHAERQRKARSMIILQDTPPPPPPQPDAHAAASHTLHTATHTATHTL
HTATHTSTLSLHSTSPALGHSPLSRRRGRPIENPYANVGQQAPPTKPQRRKSPLLKQLQV
EEQGLGMKDHDGKSDGGPGSPSRAELYQQQVLSERARVQGRRSSLFLSVEGAGSDNQVPP
LLTLSHSMDDLGELPPPAPVLSPSPTPHTFLHPLTGKPLDPSSPLALALAARERALTART
PSPEPRTRHASGSTTPILTPAASPEGRHKRTPITTPHSSPEPRSKRTTPQTSPEQRTKRT
TPQTSPELRHKRITPPLFPDGQVERPETEGGVTSPAAPSPERWRPVPLSALANESHPSLI
DRRKSLTVGSSEEEGGAYTVTLPPALLSSSDEETREELRRIGLVAPPPAFASPPGLPPPS
SLTLLPRRSGEGGGGEGSGPDSLGRRDEEEGGDEQLHDSSSSPSSLPPSIILASPPAPPS
PSSPPAHPTPSPAATSPSGLKPRLRSPIGRGRSALRDPLLKQSSDSELLPHAASSSSPSS
PLCSSPTSGRQPRYLFQRRSKLWGGGDDRSDERRGFSPDEGVSRPSALGGQGSGSAVDLT
SRSASALELSGRAGSGLDLANRLQLLNKDSHSLGEEPSPLDPGRRSPVGGARLFSSLGEL
HTISQRGYGASYTVRPGSRYPVTRRSASPSPSPSDRSIGLPSSTAPCSERPDLSSGRGLT
ILKSSSLSLPSEPKEVRFVMRSASARTRSRSPSPSPHASPCPSPVLSGPLLALRPWRQRP
LNLWNKYDVGDWLESVGLAEHRQRFQEHEIEGSHLPALTKEDYVELGVTRLGHRINIERA
LRQLLDGST
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagtccggctgctgacaccaaacatgatcgcccgcggcaacaggcggttact
aacggcaacccaacaggctctgctgttgcaagggacgacgacgcggaggacacgcctctt
ggaagcgacattgtcgtccgcattggcatcccggacctgcagcagacgaagtgtttgcgg
ttggacccagagttaccagtttggaccagtaagcagagggttctggtgacgttgactcag
tctctgtcggatgttttgaactatggtctcttccagccggcgttcaacggccgagccgga
aagtttctggacgaggagcggctgctgaaggagtatcctctccctcccatcacacccatc
ccatacctggagtttcgttacaagagaagaatttatacccaaagctacgtagacgacaaa
cagctggccaagctacacaccaaggccaacctgaagcgctttatggaacatgtgcatcag
aagaatgtggagaaggtttccaaatggttggaaaaaggcctggaccccaacttccatgac
tcggataccggagagtgtcctctgactctggcggtccagctggaggaaagctgcgagttg
atcaaagtccttcgcagcggaggagctcacctggacttcaggaccagagacgggatcacc
gctctgcatcgagccgtcctctgcaggaacagcgccgctctcactgtgaggacatttagc
ccaagcggcggaggtcatgtggagaacagcccccctccctctcctcccctcaccccccag
atgaggaagaggaggctgtacagcgctgtgccgggacgcaccttcatcgctacccgatcc
cacgtcccccagggcaacggagagatccagctgcaccgcggagagagggtcaaagtgctg
tctatcggggaaggaggattctgggaaggaaccgtgaaaggaagaactggttggtttcct
gccgaatgtgttgaagaagtacagatgagacaatacgacccaagactggagacgagggag
gatcgcaccaagaggctgttcagacattatactgtaggatcatatgacaactacacctcc
tacagtgactacgtgatcgaggagaagacggccgtgctgcagaagagagagagcgaggga
ttcggcttcgtcctcagaggagcgaaagctgagacgcccatcgaggagttcgctcccacg
ccggcgtttcccgctctgcagtacctggagtcggtggaccaggggggcgtggcctggagg
gcggggcttcggaccggagacttcctcatagaggtgaacggtaccgacgtggtgaaggtg
ggtcaccggcaggtcgtctctctgatccgacagggaggaagtcgcctgctgatgaaagtc
gtgtcagtttcccgcaaatcagaatccaacctgatcaggaagaaagctccgcctcctccg
aaacgagcccccagcacctcactgacgctccgatccaagtccatgaccgctgacctggag
gacatagagaaactggatgagatgttggcgggaaatcaacaggaagtagttctgagggct
cgaccgtcggacgacttcagagcggcgacggttaaacaacgaccgaccagccgacgcatc
acgcaggccgagatcaactccctgtttgagcgtcagggtctcgtccccccctccgcccca
gagaagagcaccatggctttacccagaggaatgtccagaaccaaaagttttggcacacct
gaggatgaccggatctcggctctgatcaatgaaagccggtttccacggagctcctcactg
acggacagcttcatccctcctcctcctcagacagctccgcctcctcctccctccgcctcc
gcctccacctctccgctcttcctcctcgactccggccctcctccctccttcctcccccct
cctcccccggccagaggggagggtctgacccgctccagcttcaagccgggggcggagccg
aggctgcaggagctcatggattcgccgacgaggagccacgcccacgccgagcgccagagg
aaggcgaggtccatgatcatcctgcaggacacgcctccgccgccgcctccgcagcctgac
gcgcacgctgctgcctctcacacgctgcacaccgccacacacaccgccacacacacgctt
cacaccgccacacacacctccacgctgtccctccacagcaccagccccgccctcggccac
tcgccgctgtcacgtcgccggggacgaccaatagaaaacccttacgctaacgtgggacag
caagccccgcccactaaaccgcagaggaggaagtcgccgctgctgaaacaacttcaagta
gaggagcagggccttggaatgaaagatcacgatggaaaatccgatggtggacccggcagt
cccagcagggcggagttataccagcagcaggttctttctgagcgtgctcgggtccagggc
cgccggtcatccctcttcctgtctgtggaaggtgcagggtcagacaaccaggtgccaccc
ctcctgaccctgagccattcgatggacgacctaggcgagctcccacctcctgctcctgtt
ctttcgccttcaccgacgcctcacaccttcctccacccgctgacagggaaacctctagac
ccgtcatctccactcgccctggctcttgctgcaagagaacgagcgctcactgcacgaacg
cctagccccgaacctcgaactagacatgcatccggctcaaccacacccatcctcactcca
gctgcaagccctgaagggaggcataaacgcactcctatcaccactccgcacagcagccct
gagccacgatccaaacgcaccactcctcagacgagccccgagcagcgaacgaagcgaacc
actccccagaccagtccagagctgaggcacaaacggataaccccgcccctattccccgac
ggacaggtggagcgtccggaaacagaaggaggagtgacatcgcctgccgccccttcccct
gagcgctggagacccgtgccgttgtcggccctggccaacgagagccacccttctctgatc
gaccggcgcaaaagcctcacagtgggcagctcagaggaggagggtggagcctacacggtg
acgctcccgccggcgttactgtcgtccagcgatgaggagacccgagaggagctgcgaagg
atcggtctggtggctcctccccctgctttcgccagtcctcccggccttcctccgccatcc
tctctcactttgttgccacggcgaagtggggagggaggcggaggggaagggagcggtccc
gactctctgggtagacgagatgaggaagaaggaggggacgagcaacttcacgacagctcc
tcctcacccagctcactccctccttcaatcatcttggcctcccctcctgctccaccttct
ccttcctcacctccggctcaccctaccccctcccccgcagccacctccccatcaggcctt
aagccccgccttcgttcacctattggccggggccgctcagcgcttagggacccactgctg
aaacaatcatcagacagcgagctcctcccccacgctgcatcctcctcctccccttcctcc
ccactctgctcctccccgaccagcgggaggcagccacgctatctgttccagcggaggtcc
aaactgtggggaggtggggatgaccgcagtgatgagaggcgaggcttcagcccagatgaa
ggtgtaagccgtccttcagcgctagggggtcaagggtcagggtcagctgtggatctgacg
agccggtcagcatctgcactggagctgagcggcagggccggatctggactggacctcgct
aatcggctccagctgctgaacaaggacagtcactctctgggggaggaaccgagtcccctc
gacccgggccggaggtcaccagtaggaggtgcaaggttgttctccagtctaggtgagctc
cacaccatctcccagcgaggatatggcgccagctacaccgtccgcccaggaagtcgctac
cctgtaacccgccgcagcgcttccccttctccttccccctctgataggtcaatagggctt
ccctcctccaccgccccctgctcagaaaggccagatctgagctcgggtcgtggtctaacc
atcctgaagtcgtccagtctcagtctcccctctgaaccaaaggaggttcggtttgtgatg
cgaagtgccagcgctcgaaccaggtcccgttcaccctcaccttctccccacgcctccccc
tgcccctccccagtcctcagcgggcccctgttggctcttcggccatggaggcagcggccc
ctcaacctgtggaataaatatgacgtgggtgactggctggagagcgtaggtctggccgaa
caccgccagcgcttccaggagcacgagatcgaaggctcccatctcccggccctcaccaag
gaggactacgtggagctgggcgtcaccagactgggacaccgaatcaacatcgagcgagcg
ctcagacagctgctggatggttccacttga
DBGET
integrated database retrieval system
