Scomber japonicus (chub mackerel): 128353146
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Entry
128353146 CDS
T09718
Symbol
ptprb
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase beta
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128353146 (ptprb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128353146 (ptprb)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
128353146 (ptprb)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
128353146 (ptprb)
BRITE hierarchy
Motif
Pfam:
fn3
Pur_ac_phosph_N
Glyco_hydro_66
Motif
Other DBs
NCBI-GeneID:
128353146
NCBI-ProteinID:
XP_053169803
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All DBs
Position
23:complement(24206525..24242999)
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AA seq
1205 aa
AA seq
DB search
MLTCKVNSSLRCLWFTSLLLLLQDLSSAAPTEDPSVSCNVSVSEPRSGLDSISLTVSTAG
RGCSFTLTPLGAETDSAECRRRSRGDEEIDTNEIGGKEQGKEKKKEEEEVNYLGTNQLGG
EDGGSKDGDGGSKDVGGDFFTCVLDHLEPGTAYQLQLRSHSDGETSNLTLHTRPSAASGL
AVTSRTCSSLGVSWQAGPGRTQRFRLQLWERPQSPDQSGLLMNETLESTATQHTLNHLTP
GRMYNVTMVTEAGGLQNSKTIEAQTVPATVSNLTTDYDNSTSLRLSWQQPEGDLDALVVT
LSSNDSSRRETNLPPNATHVTVDQLTPGSAYQVAVMSKSGELTKQTEITARTAPEAASLL
SLSPSSPLGGLLLSWSPPPAGNWESYKLLLFDGSQQLVSTTLGREAVNFSFPGTGLTPGR
LYRAVLTVESGGLTAESSCEGSTVPAPVSDLHIRHSDETSLSAMWNHAPSGSRDDYFLTI
RHGNVTVDTREVEANMRECTFNVLTPGTQYTITVTTRSGKLNTSVSLEGRTVPMALSSIT
LRSSDVDSLQASWEKPPGDVDSYTLTLLQDSVVVQNYSVPAGSSSLLMEGLTPGALYRLQ
AATVSGGVQSQTTSLQGRTVPAPVSEVTVANGGRSDALQVSWRPAGGVVDSYQVRLQDGS
RTVHSLVVSHSSLPECSFSSLVAGHLYTVAIETRSADMENTVTVQARTQPATVQNPTAVH
SAKDGFLKVSWSHAPGYLDRYVVLIRYNHSVLQNKSVSGRYNECTFSSLTPGRLYTVTVE
TWSGDYVSRVSTDGRTFPAAVSNLSLGNAGTGDLTVTWSPAPGDVDHYEVTLLFNDTRVY
PPVTLGSELRHHRLTSLTPGRLYKIVVSTFSGPNQQSQFIEGRTVPSVVRNLHLAPRKPL
PGLTDSVGGLVVSWTPGDGDLDMYIVSLSSTDGVVTENRLLPKHISSLDFLDLTPGHAYT
ITVQSQSGKLNNTKKVTGRTSPGRVTALQADNDHTTHSLTVTWERPVVEYDGYSLQVLDE
AGVILANQSVAVESRSERLGGLISGKWYRIRMVTLSGGVPSLEATAEGQTRPAAVSNLTV
TVSNTTSLSFSWLPSDGHVDTYHLSLYRVTEATANHRQDAAGSRKDHHQAAGELESQQKV
GAAADGCVFSGLRAGSLYRLQVVSWSRSMXSDSSVLARTEQICCRKRLVAVKKEQEAEYG
RRHQR
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgctgacatgtaaagttaacagttctctccggtgcctctggttcacctctctgctgctg
ctgctccaggatctgagcagcgcggctcccacagaggacccgtcggtctcatgtaacgtc
tctgtgtctgaaccacggtccggtctggactccatatctctgactgtgagcacagctgga
cgcgggtgctccttcactctgacacccctgggtgctgagacagacagcgcagagtgtagg
agacggagcagaggagatgaagagatagacactaatgagatcggaggaaaggagcaaggg
aaggagaagaagaaggaggaagaggaggtgaactatctgggaaccaaccagctaggaggt
gaggatggaggaagcaaggatggagatggaggaagcaaggatgtaggaggcgacttcttc
acctgcgtgctggatcacctggagcctggaaccgcctaccagctgcagctccgttcccat
agcgacggggagacgagcaacctcactctgcacacacgaccgtcagcagcgagcggcctg
gcggtgacctccaggacctgcagcagcctgggtgtttcctggcaggccggccccggcagg
acgcagcgcttcaggctgcagctgtgggaacgtcctcagagtccggatcaatcaggtttg
ctgatgaacgagacgctggagagcacagcgacgcaacacacgctcaaccacctgacgcct
ggacggatgtacaacgttaccatggtgacggaggccggcggtctgcagaacagcaagacg
atcgaggctcagacagtcccagcaaccgtttccaacctcaccaccgactacgacaacagc
acaagcctgcggttgtcgtggcaacagcccgaaggtgacctggacgcgctcgtcgtcacc
ctctcgtccaacgactcgagccggcgggagacgaaccttcccccgaacgccacccatgtc
acagtagatcagctgactccaggctcggcctatcaggtcgctgtgatgtcaaagagcggc
gagctgacaaagcaaacagaaatcactgctaggacagctccggaggcagcctctctcctc
tccttgtccccttcctcccccctcggtggtctcctcctctcttggtcgcccccccccgct
gggaactgggagagctacaagctgcttctgtttgacggctcccagcagttagtcagcacc
actctgggccgagaagctgtgaactttagctttcctgggacgggactaacgcctgggagg
ctgtacagagccgtgctgacagtggagagcggaggactgacggctgagagcagctgtgag
ggatcaacagttcctgctccggtgtcggaccttcacattcgacactcggacgagacttct
ctgagcgccatgtggaaccacgctccctctgggtcacgtgacgactacttcctgacaatt
cgccatggtaacgtcaccgtggataccagggaggtggaggccaacatgagggagtgcacg
ttcaacgttctcacacctgggacgcagtacaccatcaccgtgacgaccaggagcgggaaa
ctgaacacctctgtgtcattggagggaaggacagtccccatggcgttgagtagcatcact
ctgaggagctctgacgttgacagtctgcaggcgtcgtgggaaaaaccaccaggagacgtg
gactcgtacacgttgaccctgctgcaggacagtgtcgtggttcagaactacagcgttcca
gctggttcttcttctctgctgatggagggtttgacacccggcgccctctacaggctgcag
gccgccactgtcagcggaggagttcagtctcaaacaaccagcctgcagggacgcacagtc
ccagcgccggtctccgaggtaacggttgctaacggcggccggtcggacgcgctgcaggtg
tcatggcgtccagcagggggcgtggttgacagctaccaggttcgtcttcaggacgggagt
cggaccgtgcactcgctggtggtgtcccactcctccctgcccgagtgctccttcagctcg
ctggtcgctgggcatctctacacggtcgccatagaaacgaggagcgctgacatggagaac
accgtcacggttcaagcacggacacaacctgctactgtgcaaaacccaacagcggttcac
tctgcaaaggacggcttcctcaaggtgagctggagtcatgcacctggatatctggaccgc
tatgtggttctgatccgttacaaccacagcgtcctgcagaacaagagcgtctccggcaga
tacaacgagtgcaccttctcgtccctgacaccggggagactctacaccgtcaccgtggaa
acatggagcggagactatgtcagcagggtgtccaccgacggacgcacatttccagcagcg
gtgagcaatctgtcgctaggcaacgcaggaacaggtgatctgactgtgacctggagtcct
gcccctggagatgtggaccactatgaggtcactctgctcttcaacgacactcgggtttat
cctccggtcacgttgggcagcgagctgcgtcatcaccggctgacctcactgacacctggg
cggctttataagatcgtggtgtcgacgttcagcggtccgaaccagcaatctcagttcatc
gagggacggacagttcccagtgtggttagaaacctccacctggctccccggaagcctcta
cctggcctaacagactctgtgggggggctggtggtctcctggacacccggagacggagac
ctggacatgtacatcgtctcactgtcctctacggatggcgtcgtgaccgagaatcgcctc
ctccccaaacacatctcctctctagacttcctggatctgaccccaggccacgcctacacc
atcactgtccaatcacagagcgggaagctgaacaacaccaaaaaagtcaccggcaggacc
agccccggcagagtcacggctctgcaggcggataacgaccacaccacccacagcctcacc
gtcacctgggagcggccggtggtcgagtacgatggttacagcctgcaggtgttggacgag
gccggcgtcattctggctaatcagtcggtcgctgtggagagtcgcagcgagcgtctggga
ggcctgatttctgggaagtggtaccgcatccggatggtgacgctgagcggcggcgtcccg
tcgctggaggccacagccgaggggcaaacacgtccagctgctgtcagtaatctaacggtc
accgtgtccaacaccacgtctctgtccttctcctggcttccctctgacggccacgtcgac
acctaccacctctcgctctacagagtcacagaggcaacggccaatcacagacaggacgct
gcaggtagcaggaaggatcatcaccaggctgctggtgagttagagagccagcagaaggtg
ggtgcagctgcagacggctgtgtgttctccggcctgcgagcaggaagtctgtacaggctg
caggtggtgagctggagccggagcatgnacagcgactcgtctgtactcgccagaactgag
cagatctgttgccggaagcgactagtagcagtgaagaaggagcaagaagcagagtacggc
agaagacatcaacggtaa
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integrated database retrieval system
