Scomber japonicus (chub mackerel): 128353175
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Entry
128353175 CDS
T09718
Symbol
stab2
Name
(RefSeq) stabilin-2
KO
K19013
stabilin-2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128353175 (stab2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sjo00536
]
128353175 (stab2)
Glycosaminoglycan binding proteins [BR:
sjo00536
]
Hyaluronan
Cell surface receptors
128353175 (stab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_MSP1_1
FXa_inhibition
EGF_Teneurin
EGF_laminin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
128353175
NCBI-ProteinID:
XP_053169827
LinkDB
All DBs
Position
23:26153635..26220037
Genome browser
AA seq
2525 aa
AA seq
DB search
MMMMMKTSAASQQNFCSNSTVLRTRTACHSCSISAFIPCPAGYRQTPGSTAKDCKYYIRT
VSLQLPISGCSFECYKEEELKTCCPGFWGPDCIECPEEADRPCSSRGVCSDGLGGNGTCS
CQVGFAGTACEDCEANRYGPSCSSVCSCVHGLCDAGLKGDGRCTCFSGYGGTSCDKELPE
CASLSCQQNSRCMEEALTGRLVCQCLHGYRQEAAQCVSVNPCLQQVCHPQAACVHSGPDQ
HLCACNHGYSGDGRVCMAVDPCQNKHGGCSTDSTRCVYDGPGQSHCECLPGFELLDGVGC
SLKDSCRPGSCHEKANCSTLGPGRVQCTCLQGYLGNGKTCYGNIMQRLKDLNTEPGGQWS
GQLSSAIALFDSVSWPLENLGPFTVFVPINKGFRGTSVRDLTADPSKAAYLCKMHLAAGM
MSSATLRRHDVFYTLTGKSAETDTSGRGGQTKIRIHGSRKKGLLLQSDVVASNGNIHIIN
KLMDSVAPTVDSDAEENLMKIISDYGKFDKLKFLIKRAGMALLLDIPGPITLFAPSSAAF
DAMATGELEYLSSAEGFHKLLEFLRNHVVSSSLEVFNVVSSPRIMTMANQVLTVNVTENG
QVLVNGAAVLEAAVQAKNGRLYVMDRVLTPASIEPVLPHRCDITENKIIKGECVRCSKAK
LSQCSSGVYTGESTFGCIYTLTVSGVSIPATGCSPLCNATVTTRACCRGFFGSDCRLCPG
GFQTPCSGNGNCSDGVEGSGSCACRPAFSGSRCQFCSSSDRYGANCDRACVCVHGQCDNR
PDSDGSCKRDSCVSGFTGRLCDRRTAACGVQAQFCHAHADCDFSQGAARCVCKPGYQGDG
ITCVESDPCAAPLRGGCSVNAECVRTGPATRSCRCLPGWREDGDDCQPINNCLAADGGGC
HANASCIYVGPGQSECRCKEGYRGSGLDCEAVNRCVSEVGGCHFLASCRLLSSQWSCVCD
EGYQGNGQVCYGSVQQELMSLPEASDFLSWTTESGVSLSDQNVTLLVPSSAAVSKMSPED
KTFWTRSGNLPSLIRNHMIEGFYSLSDLSTMASVTSFLKTSLPVSTTNEVTAVGGASVTA
SNMAATNGLLHLIDQVLVPDRKLSEGLLATLALRPDFSLFRSFLIEYNLTEEIEHNEEFT
VFAPTDAAITHFLQETGATALDVNTTRYHLVASQRLLRTDLQPGGYKHTLLGFSYQLGFY
PRDGKLFVNDAQLNVSNILSGKGVIHGLSAVLQIIRNRCDDATYQKVMGPCLDCVFPRSE
ICPSDSVLDRSEKKRKCMFSRMFEDERLLTIGCRASCLKTTIVRRCCSGYFGEHCEACPG
PRGGAEGPRGGACYGNGVCVDGTNGTGVCECFKGFNGTACETCQSGKYGVHCDQDCRCGN
GRCSDGLKGDGTCQCDVGWRGILCDQKVESRADELCGSVTCHTSANCVIGGVGPLCLCAA
GFQGNGTSCQATDPCEVGNGGCSLDSVCKRTRPGRRDCVCKNGFMGDGLVCVEINPCLEG
NGGCHGNAECVHVGPNKTSCSCSDGFSGDGQTCKMIDLCLKGNGGCDVNARCNTTSPAVR
TCSCRSNFVGDGLTCRGTVGKEILKRRLRDFYLGLMMVEVSLKGRGPFTVFAPNSEAIVT
DRSGDGKEQFASIMRSHIVMCHTLLPADLSRPRNMTALSGLVLSTSMSPQGSILVNQAAI
TYSDGVSVNGIYHEINRLLFPPNVNGDKQPDLPMNLTDVAQRHGYQSFYRLLQEAGVMDQ
VHDGIYQPLTVFLPSDDVMASLPQEQKDFLFHPHNRAQLLEYLKYHILPGQKIYAEGLIY
ADSARTLQGSTLSFSCGGADAIGEVFVNDGRCRITQRHLVFSHGIAYGIDCLLTPPSLGG
RCDTQTNLDLELGCGLCTSSAARCPRGSKLKKVERCDLPSMFITKNSGCRSICTINFWHP
NCCHGYYGRDCLACPGGAGAPCSNHGNCDGGRLGNGTCTCDAGFGGVACERCLEGFYGPT
CTACNCSGHGSCDDGLRGTGSCFCEISWTGEHCETQRDGLSVCSPSCSSHAVCLQNNTCV
CRPSHVGDGFTCTVVDRCQLWNGGCARAAKCSQSGDTVSCSCPKGHSGDGYTCLPVDPCV
AGDNGGCHEHATCSMTAPGKRKCSCKDGYLGDGLTCEAKQLPISRCLQGNGRCHQDAKCT
DLHFEDATLGVFHQRSALGQYRLNYTAAQQTCAAEGGTLASYTQLSYAQQGGLNMCAAGW
LDGARVSYPTTYANPNCGFGHVGIVDYGYRRNLSETWDAFCYRMKEVQCECQPGYLGDGF
SCTGNLLQVLRSTPTFSTFLTIILNYSQVSESGKQLMKRLTNLSVPSTLFVPDNSGLPDN
QTLSQRDIEYHLSEGQALSLSQLKNGSRIRTRVGSLSVLGVSNLLDPSSLSSRYINDQFV
TDSDILASNGIIHVLQGPLKAPPPRQELHVTHKAGLGVGLLLLLLLLGGVMFVGYHFYTR
KTKPFQFHYFKEDEEEDEAPPADSSRSISNPVYEAAPEPAESSTCDVTDKHEVVNGGSYD
LLQDG
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgaagacctcagctgcttctcaacagaacttctgctccaactcgacc
gtgttgagaacccggaccgcgtgtcactcctgcagcatcagcgccttcatcccctgcccg
gccggatacagacagacccccggttccaccgccaaggactgcaagtactacatccggacg
gtctccctgcagctgcccatcagcggctgctccttcgagtgctacaaagaggaagaactg
aagacctgctgtcctggtttctggggtcctgactgcatcgagtgtccagaagaagctgac
agaccctgcagctccagaggagtctgctctgatgggctgggagggaacgggacctgcagc
tgccaggtgggctttgcaggaaccgcctgtgaggactgtgaagctaaccgatacggtccc
agctgcagctcagtgtgctcgtgcgttcacggtctgtgtgacgctggtctgaaaggtgac
gggaggtgcacgtgcttctctggatacggaggaaccagctgtgataaagagcttcctgag
tgtgcgtctctgagctgccagcagaactctcgctgtatggaagaagctctgacgggtcgg
ctggtgtgtcagtgtctccatggttaccgacaggaagcggctcagtgtgtgtctgtgaac
ccgtgcctgcagcaggtgtgtcaccctcaggccgcctgcgtccactcgggtccggaccag
cacctgtgtgcctgtaaccatggttacagcggggacggacgcgtctgcatggccgtcgat
ccctgtcagaacaaacatggaggctgctccaccgactccacccgctgcgtctacgatgga
cctggacagtctcactgtgagtgtctcccgggcttcgagctgctggacggcgtcggctgc
agcctgaaggactcgtgtagacctggttcctgtcatgagaaggccaactgcagcacgctg
ggaccaggacgagtccagtgcacctgtctccagggttaccttggcaacggtaaaacctgc
tacggcaacatcatgcagcgtctgaaggatctgaacactgaacccggcgggcagtggagc
ggccagctgagcagcgccatcgctctgttcgattctgtgtcgtggccgttggagaatttg
ggtcctttcacggttttcgttccgatcaataaaggcttcagaggaacgtcggtgagggat
ctgacagctgacccgtctaaagctgcgtacctgtgtaagatgcacctggcggcaggaatg
atgtcatcggccaccctgaggagacacgacgtcttctacacgctgacgggcaaatcagct
gagacggacacttccgggaggggcgggcagactaagatccgtatccatggcagcaggaag
aagggtctgctcctccagtctgacgttgttgcttctaacggaaacattcacatcatcaac
aagctgatggacagcgtggctccgactgtagacagcgacgcagaggagaatctgatgaaa
atcatttcagactacggaaagtttgacaaactcaagtttttaataaagagagcaggaatg
gcgttgctcctcgatattcccggtccgatcacgctgttcgctcccagcagcgccgcgttt
gacgccatggcaacgggagagctggagtacctgagcagtgctgaaggcttccacaagctg
ctggagtttctcaggaatcacgtcgtctcttcctcgctggaggtgtttaacgtcgtgtcc
agccccagaatcatgacgatggccaatcaggttctgaccgtcaacgtgacagaaaatggt
caggtcctggtgaacggagcggccgtgctggaggcggccgtgcaggcgaagaacggacgt
ctgtatgtgatggacagagttttgactccggcctccatcgaacccgtgctgcctcaccgc
tgtgacatcaccgagaacaagatcatcaagggtgagtgtgtccggtgctcgaaggccaaa
ctgtcccagtgctcgtctggagtttacacgggtgagtccacattcggctgcatttacacg
ctcactgtgtcgggagtcagtatcccagcaaccggctgctcaccgctctgcaacgccact
gttacgaccagagcgtgctgcagaggtttcttcggctcagactgcagactttgtcccgga
gggtttcagactccgtgttcaggaaatggaaactgctcagacggggtagagggaagcggg
tcgtgtgcgtgtcgtccagcgttcagcggctctcgctgtcagttctgttcgtcctccgac
agatacggagccaactgtgaccgagcgtgtgtgtgtgtccatggtcagtgtgataaccgt
ccagactctgatggaagctgtaaacgggactcgtgtgtttctgggttcacgggtcggctg
tgtgaccgccggacggcagcgtgtggcgttcaggctcagttctgtcacgcacacgccgac
tgtgacttcagccagggagccgccaggtgtgtctgtaaacctggttaccaaggcgacggc
atcacctgtgtggagtcggacccgtgtgctgctcctctgagaggaggctgcagcgtcaac
gctgaatgtgtaaggacgggtcccgccactcgctcctgtcgctgtctgcccggatggagg
gaagacggagacgactgtcagccaatcaacaactgccttgctgcggatggaggcggttgc
catgccaacgcctcctgcatctacgtgggacctggacagagtgagtgcaggtgtaaggag
ggctacagaggcagcggtctggactgtgaggctgtgaatcgctgcgtcagcgaagtcgga
ggatgtcacttcctggccagctgtcggctgctctcctctcagtggtcgtgtgtgtgtgat
gaaggatatcaggggaacggacaggtgtgttacggctccgtgcagcaggagctgatgtcg
ctgcctgaggcctcagacttcctctcctggaccacagagtccggtgtgtctctctcggac
cagaacgtcacgctgctcgttccgtcttcagctgccgtcagtaaaatgtctccagaggac
aaaacgttctggaccaggagcggaaacctgcccagcctcatcaggaatcacatgatcgag
ggtttctattcgttgtcggacctcagcaccatggcctctgtgacctcattcctcaagaca
tcacttcctgtttcaacaaccaatgaggtcacagctgtgggcggagccagcgtcaccgcg
tccaacatggccgccaccaacggactgctgcaccttatcgatcaggttttggttcctgac
aggaagttgagtgaaggcctgctggcgacgctcgctctcagacccgacttctctctcttc
agatcgtttctcatcgagtacaacctgacggaggagatcgagcacaacgaggagttcacc
gtgttcgctccgaccgacgccgccatcactcacttcctccaggaaacaggggcgaccgct
ctggatgtgaataccactcgttaccacctggtggcgtcgcagcgtctgctgaggaccgac
ctgcagcccggcggatacaaacacacgctgctggggttctcctaccagctgggcttctac
cctcgagacgggaagctgtttgtgaacgacgctcagctgaacgtgtctaacatcctgagc
ggtaaaggagtgattcacggcctgtcagctgttctgcagatcatcaggaatcgctgtgat
gacgccacgtatcagaaagtcatgggtccgtgtctggactgtgtgttcccacgaagtgaa
atctgcccgtctgactccgttctagacagatcagagaagaagaggaagtgtatgttcagc
cggatgtttgaggacgaacgtctgctgaccatcggctgcagagcttcctgcctgaagacc
accatcgtgcgcaggtgttgttccgggtatttcggggagcactgtgaggcgtgtcccggg
ccgaggggcggagccgaggggccgaggggcggagcctgctacggtaacggtgtgtgtgtg
gacggcaccaacgggaccggagtgtgtgagtgcttcaaaggcttcaacgggacggcctgc
gagacctgccagagcgggaagtacggagtccactgcgaccaagactgtcgctgtggtaac
ggacgctgcagcgacggactgaagggagacgggacgtgccagtgtgacgtcggctggaga
ggaatcctgtgtgaccaaaaggttgaatccagagcagatgagctgtgtggctcagtgacc
tgtcacaccagcgccaactgtgtgatcggaggagtcggcccactctgtctctgtgctgct
ggatttcaaggaaacggaacttcctgtcaagctacagacccttgtgaggtgggtaatggc
ggctgcagtctggactctgtgtgtaagagaactcgacccggccgtcgtgactgcgtctgt
aagaacggcttcatgggcgacggactcgtgtgtgtcgagatcaatccctgcctggaagga
aacggcggttgccacggtaacgcagagtgtgttcacgtcggaccaaacaaaacgtcgtgc
agctgcagcgacggattctcaggcgacggacaaacctgcaagatgatcgacttgtgttta
aagggaaacggcggctgtgacgtgaacgccaggtgtaacacgacgagtcccgccgtccgg
acctgcagctgccggagcaacttcgtaggagacggtttgacctgcagaggcacagtgggc
aaggagatcctgaagcggcgcctcagggacttttatttgggtctgatgatggtggaggtc
tctctgaagggtcgcggcccgttcaccgtgttcgctcccaacagcgaggcgatcgtaacc
gaccgaagcggagacggaaaggagcagttcgcctccatcatgcgcagccacatcgtcatg
tgtcacactctgctgcccgctgacctcagcagacccagaaacatgaccgcgctgtctgga
ctcgtcctcagcacgtccatgtctcctcagggcagcatcctcgtcaaccaggccgccatc
acctacagcgacggcgtcagcgtcaacgggatttatcacgagatcaacaggcttctgttt
cctcccaacgtcaacggagacaagcagccggacctccctatgaacctgaccgatgtggct
caacgtcacggttatcagagcttctaccgactgctgcaggaagcgggtgtgatggaccag
gtgcatgatgggatttaccagccgctgaccgtcttcctgccctccgatgacgtcatggcg
tctctgcctcaggagcagaaggacttcctgtttcacccgcacaaccgagctcagctgctg
gagtacctgaagtatcacatcctgccgggtcagaagatctacgctgaaggtctgatctac
gcagactcggctcgtacgctgcagggatcgactctgagcttcagctgtggaggagccgac
gccatcggagaggtctttgtgaatgatggcaggtgtcgtatcactcagagacacctggtg
ttcagtcacggtattgcgtacggcatcgactgtctgctgactcctcccagcctggggggg
cgctgtgacacgcagaccaacctggacctggagctgggctgtggactgtgcacttcctct
gctgctcgctgcccccgaggatccaaactgaagaaggtggagaggtgcgacctgccctcc
atgttcatcactaagaactccggctgtcgcagcatctgcaccatcaacttctggcatccc
aactgttgccatggttactacggccgagactgcctcgcgtgtccgggcggcgccggcgct
ccctgcagtaaccatggtaactgtgatggaggtcgccttggcaacggcacctgtacctgt
gacgcagggtttgggggcgtggcctgcgagcggtgcctggaggggttctacggacccacc
tgcacagcctgtaactgctcaggacacgggtcatgtgacgatggactcagaggaacaggt
tcttgtttctgtgagatcagctggaccggagaacactgtgagacccagagagacggactc
tcagtctgttctccgtcctgttcgtctcacgccgtctgtctccagaacaacacctgcgtg
tgtcgaccgtctcatgttggagacggcttcacctgtacagtggtggacaggtgtcagctg
tggaacggaggatgtgcccgagcagcaaagtgttctcagagcggagacacggtgagctgc
agctgtcctaaaggacactctggagacggctacacctgtctacctgtggacccgtgtgtt
gccggggacaacggcggttgccatgaacacgccacctgcagcatgacggcgccggggaag
aggaagtgctcgtgtaaagacggctacctgggagacggactcacctgcgaagccaagcag
ctgccaatcagccgctgtctccaaggcaacgggcgatgtcatcaggacgccaaatgcaca
gacctccacttcgaagacgcgaccctcggtgtgttccaccagcgctcagctctgggtcag
tacagactgaactacacagctgctcagcagacctgcgctgccgagggaggaactctggcc
tcctacactcagctgtcctacgctcagcagggggggctgaacatgtgtgctgccggctgg
ttggacggggcccgggtctcgtacccgaccacctacgcaaaccccaactgcggctttgga
cacgtcggcatcgtggactacggttaccgtagaaacctgagcgagacctgggacgcgttc
tgctaccggatgaaagaggtgcagtgtgagtgtcagcccggttaccttggagacggattc
agctgcacaggaaacctgctgcaggtcctcagatctacacccaccttctccaccttcctc
accatcatcctgaactactctcaggtgtcagaatcggggaaacagctgatgaagcgtctc
actaacttgtccgtcccgtccacgttgtttgtccctgacaacagcggcctgcctgacaac
cagactctgtctcagagggacatagagtaccacctgtcggagggacaggctctgtctctc
agtcagctgaagaacggcagtcggatcagaactcgagtcggcagcctctccgtcctcgga
gtgtccaacctgctggacccgtcctctctgtcgtctcgttacatcaacgatcagtttgtg
accgactccgacattctggcatctaacgggatcatacacgtcctccagggaccgctgaaa
gccccgccccctcgccaggagctgcatgtgactcataaggctggactgggggtgggactg
ctgctgctgctgctgctgctgggtggagtcatgtttgttgggtatcacttctacacccga
aaaaccaaacccttccagttccactacttcaaggaggatgaagaggaggatgaagctcca
cctgcagacagcagtcgcagcatctctaatccggtttatgaagcagctccagaacctgct
gagtccagcacctgtgatgtcacagacaaacacgaggtggtgaacggaggatcgtacgac
ctgctgcaggacggctga
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integrated database retrieval system