Scomber japonicus (chub mackerel): 128353212
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Entry
128353212 CDS
T09718
Symbol
rint1
Name
(RefSeq) RAD50-interacting protein 1 isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128353212 (rint1)
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
128353212 (rint1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
128353212
NCBI-ProteinID:
XP_053169863
LinkDB
All DBs
Position
23:3316703..3382100
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AA seq
799 aa
AA seq
DB search
MAATTAVETNMDKPIDYELNPGYTTTKHSESVSVDLLDSVELQEYVVDFLEKEVGSDLKS
LKTVGDLLGKLREENNVLEKQVLTESSSVPPKVSAALSTAEEARCSLDDLLQREQHISNM
LHQHLQGAHAWMDNLGQTLNQVNTIEKHMKYLQCLQHIEELSAAVQQCLMTSSVWEAIRA
VDSMAMLDTGLNQSGCSHLQEFLQETLHFWHKIIKDRLASEFEKVLTQLHWPIISPPTQS
LTPTVNSHEITSQLELLVIQLLALQSSDDLISQRVLACSQSGPSTQPVSSGTRLSQAPPL
CLPIQIMLLPLGRRFRYHFYGNRQTNSLSKPEWYLTQVLMWMGNNSTFMEEKIQPILDQA
GVTIRARVELCRGLLSLVQEKVARDASKLLYDDALFCHLVEEVLQFEKELRSNQSYPAVL
PGLLNLLLEETTLQKWLSVEKKMAVEKVDSMLSSEGAWSSQYKDISDMDELKAPDCAETF
MTLLQVITERYRALPCPSAQLKFLELQRELVDDFRIRLTQVMKEESRCPLGARYCAILNA
VNYISTILGDWGDNVFFLQLQQAAVSLGEEVVLGGLGVTEVGRLASLEGSLFEGLLALLE
RLKGDMIGRLLDGIMREVTEKAKPYRQDRWFSLPSLQDQTAMSLSSSACPMMLCVRDRLL
NLHQILSLSLFQQAWQAFAERLDNFLYQDVILSNHFSDGGATQLQFDMTRNLFPLFGHYC
KRPENFFKHVKEACIILCLNVGSAILLRNFLKESEEEMRDWAGGGDPPPEYALNELGVYC
LAPCDVLILLNLRASWPGQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaccacagcagtagaaacaaatatggacaaaccgatagattatgaattaaat
cccggttatacaaccaccaaacatagcgaatcagtttcggtggatctgctagattccgtg
gaactacaggagtatgtcgtagatttcctagagaaagaggttggaagcgacctgaaatca
ttgaagactgttggcgacctgttgggaaaattaagagaggaaaacaacgtactagagaaa
caggttctgactgaatcgagttctgtgcctcctaaagtttctgcagctctgtccactgct
gaagaggctagatgttctttggatgacctgctgcagagagagcaacatatctccaacatg
ctgcatcagcacctacagggggcccatgcttggatggataatcttggccagacacttaac
caagtcaacactatagagaaacatatgaaatacctgcagtgcctacaacatatagaggaa
ctcagcgctgcagtccagcagtgtctaatgaccagcagtgtctgggaggccataagggca
gtagacagcatggctatgctggacactggactaaaccagtctggatgttctcacctccag
gaattcctccaagaaacccttcatttctggcacaagatcatcaaagacagactggccagt
gaatttgagaaagtgttgactcaactgcattggccgatcatctcccctcctacccagtca
ctgacacccactgtcaattctcatgagatcaccagccagctggaactgctagtcatacag
ctgctggccctgcagtcctctgatgacctcatatctcagagagtgttggcctgcagtcaa
agtggaccatctacccagcctgtttcttcagggacacgtttgtcccaagctcctccactc
tgcctgcccatccagattatgctgctgccacttggcaggaggttccgataccacttctat
gggaatcgacagaccaactccctcagcaagccggagtggtacctcacacaggttctgatg
tggatggggaacaactcaacctttatggaggagaagatacaacccatcctggatcaagct
ggggtcaccattcgtgccagggtggagctatgtcgaggtctattgtctcttgtccaggag
aaggtggccagggatgcctctaagctgctgtatgatgatgcacttttctgtcacttggtt
gaggaagtactgcagtttgagaaggagctgcgaagtaaccagtcatacccagctgtgcta
cctggattgcttaatctcctgcttgaggaaacaacccttcagaagtggctctctgtggaa
aagaagatggcagtggagaaggtggattccatgctgtcatcggagggggcatggagctcg
caatacaaagatatcagtgatatggatgagctgaaggctccagattgtgctgagactttc
atgactctgctgcaggtcatcactgagcgctaccgggccttgccctgcccttctgcacaa
ctgaaatttctggagctacagagagaactggtggatgacttccgtatacgactcacccag
gtgatgaaagaggagtctcgttgcccacttggtgctcgttattgtgccatccttaatgct
gtcaactacatttccaccatcctgggagactggggagacaatgtgtttttcttacaactg
cagcaggcagcagtttcacttggtgaggaagtggtactaggaggcctgggtgtgacggag
gtgggccgtctagcttctctggagggttcgctatttgaaggtcttttggcgttactggag
cgactgaaaggagacatgattggaagacttctggatgggattatgagagaagtcacagaa
aaagccaaaccatatcgccaagacaggtggttttctctaccatccctacaggaccagact
gccatgtccttgtctagttcagcatgtcccatgatgctttgtgtgagggacagattgttg
aaccttcatcagatcctaagtctttctctgttccagcaggcttggcaggcctttgccgag
agacttgacaattttctctaccaggatgtgatcctgtctaatcattttagtgatggcggg
gcgactcagcttcagtttgacatgaccagaaacctatttcctctgtttggtcactactgc
aaaagacctgaaaatttctttaaacatgttaaggaggcgtgtatcatcttatgtcttaat
gtgggctccgcgattctactaaggaatttccttaaagagtcagaagaagagatgagagat
tgggcaggagggggtgatcctccaccagaatatgcattgaatgagttgggggtttactgc
ttggcaccctgcgacgtgttgattctcctcaacctcagagcctcctggccaggacagtaa
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