Scomber japonicus (chub mackerel): 128353264
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Entry
128353264 CDS
T09718
Name
(RefSeq) leucine-rich repeat neuronal protein 3
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128353264
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128353264
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_9
ig
LRR_1
fn3
Ig_2
LRR_EndoS
LRRNT
LRRCT
Pur_ac_phosph_N
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
128353264
NCBI-ProteinID:
XP_053169933
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All DBs
Position
23:11229568..11231697
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AA seq
709 aa
AA seq
DB search
MKDVSFVDRLFVGLAMASFVLATEERPDCPKLCVCEIRPWFSPSSVYMEAQTVDCNDLGL
FSLPDKLPLGTQVLLLQTNNVAKIDKPLDYLANITEIDLSQNNLSSINDVHLGNLPQLLS
LHMEENWIRELPDQCLAEVANLQELYMNHNLIFSISPKAFQGLKNLVRLHLNSNKLKAIH
REWFEPMPNLEILMIGENPVLLIDDMNFKPLSNLRSLVLTRMNLSQLPDDALSGLDNLES
ISFYDNIFPEVPHSALRNVKNLKFLDLNKNPIARIQRGDFVDMLHLKELGINSMPELVSI
DSFALNNLPELTKIEATNNPKLSYIHPNAFYKLPRLETLMLNGNALSALHRITVESLPNL
REVSMHSNPIRCDCVVRWMNMNKTNIRFMEPDSLYCVEPPEYEGQHVRQVHFREMMEICL
PLISPESMPGQIKARNGSSVSLHCRAFAEPEPDIYWITPSGIKVLPNTVSDKFYMHPEGT
FDIYDITKNEAGPYTCVAHNLVGADLKSVSVEVNGYFPQPANGSLNILIKSVETHSILVS
WQASPGTLAPNIKWYTLPDANHPTTAFTSRVPSDVQVYNLTHLSPATEYKVCVDVRSIHY
NHDTKCVNVTTKGLELAVKNTEKWDAAVITVFGVFLAVISVACLLIYVSLRNHHLYGDIR
RCDSKASLTSMEATSMHSPFFTKLWVSGKGLPSGVEVKATVINVSDNAF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgtgtcattcgtggatcgtctctttgtcggcttggccatggcctcttttgtc
ttggccactgaggagaggcctgattgcccgaagctctgtgtttgtgagattagaccctgg
ttttctcccagttcagtctacatggaggcacagacagttgactgtaatgacttgggactc
tttagcctgccggacaaattacccttgggcacacaggtactattactgcaaacaaacaat
gttgccaagattgataaacctttggattacctggccaacattacagagattgatttatca
caaaacaacttatcctctatcaacgacgtccatctggggaatcttcctcagcttctgtct
cttcatatggaggagaactggatacgagagctgcctgaccaatgtctggcagaggtggct
aaccttcaggagctctacatgaatcacaaccttatcttctccatttccccaaaggccttt
cagggtctcaaaaaccttgtacggctccacctcaattctaacaagctgaaggccattcat
agagagtggttcgaacccatgccaaatctggagatcctgatgattggtgaaaatccagtt
cttttgattgatgatatgaacttcaaacctctcagtaacctccgcagtcttgttcttacc
agaatgaacctatctcagcttcctgacgatgcactgtctggtcttgataacttagagagt
atctcattctatgataatattttccctgaggtgccccattcagcactgagaaatgtaaaa
aatcttaagtttttggatcttaataaaaaccctattgcgaggatacagagaggggacttt
gtggatatgctccatctgaaagagctggggattaatagcatgccagaactagtttccatc
gacagctttgctctcaataacctccctgagctgaccaaaatagaagccaccaacaatcct
aaactctcctacatccatcctaatgctttctacaaactaccacgtctggaaaccctaatg
ctgaatggcaatgcgcttagtgccctccacaggattactgttgagtcccttccgaatctc
agagaggttagcatgcacagcaaccccatccgctgtgactgcgtagtccgctggatgaac
atgaacaagaccaacattcgtttcatggagcccgactctctgtattgtgttgagcctccg
gagtacgagggccagcatgtccgacaggtgcactttagggagatgatggagatttgtctg
ccactcatttctcctgaaagcatgcccgggcaaattaaagcacggaatgggagctcggtt
tcactccactgtcgggcctttgctgaaccggagccagacatctactggatcaccccgtct
ggtattaaagtcctgcctaacactgtgtccgacaaattctacatgcacccagagggaact
tttgacatctatgatataacaaaaaatgaagctggtccttacacttgtgttgcccataat
ctggttggagctgatcttaaatctgtttcagttgaagtgaatggatattttccccaacct
gcaaatggatctctgaacatcctaataaagtcagtggagacacactccatcctggtttcc
tggcaggcaagtcctggcactctggctccaaacattaaatggtacacccttccagatgct
aatcatcccaccacagcatttacttccagggtaccctctgatgttcaagtctacaacctt
acccacctcagccctgccactgagtacaaagtatgtgtggatgtccgtagcatccactac
aaccatgacaccaaatgtgtcaatgtcaccactaagggattagagctggcagtcaagaac
acagaaaaatgggacgcagcagtaattactgtctttggtgtgttcttggctgtgatttca
gtggcatgcctgcttatttacgtgtctctgaggaaccaccacctttatggggatataagg
agatgcgactccaaagcttcgctgacatcaatggaagctaccagtatgcattctccgttc
tttacaaagctgtgggtttcaggtaaaggactgccaagtggagtggaagtgaaagccaca
gtcataaatgtatcagacaatgccttttaa
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