Scomber japonicus (chub mackerel): 128353380
Help
Entry
128353380 CDS
T09718
Symbol
slc6a1l
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128353380 (slc6a1l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128353380 (slc6a1l)
Transporters [BR:
sjo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128353380 (slc6a1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
RhodobacterPufX
Motif
Other DBs
NCBI-GeneID:
128353380
NCBI-ProteinID:
XP_053170044
LinkDB
All DBs
Position
23:complement(15559244..15566788)
Genome browser
AA seq
596 aa
AA seq
DB search
MGKTGQSTVDLNSPTEVKQAVPFEEMDHMAPSAEEKKKEEPPDRGSWKGKFDFLLSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLVFAGIPLFLLETSLGQFTSVGGLGVWKLIP
MMKGVGLAAVVLSFWLNIYYIIIIAWALYYLFNSFASELPWQSCDNPWNTENCFSNYSLT
DTTNLTSAVTEFWERNMHQLSGGLEEPGEVRWPLVGTLALAWVLVYFSIWKGVEWTGKVV
YFSATYPYFMLFILFFRGVTLPGAIDGIRFYITPDFNKLMQSEVWLDAATQIFFSYGLGL
GSLIALGSYNSYNNDVYKDSIIVCCINSFTSMFAGFVIFSIVGFMSYITKKPVKELAASG
PGLAFLAYPQAVTQLPMSSLWAILFFSMLMMLGLDSQFCTVEGFITALMDEYPLLLRKRK
KIFILIVCLISFVIGFSNITQGGLYVFKLFDYYSASGMCLLYLVFFETVSISWFYGAERF
YQNIEDMIGYRPCGWWKLCWMFFTPMICLGVFTFSAIEMTPLSLGKYVYPLWGQVIGWVM
AMSSMILIPGYVIYMFCTTKGSIKQRWRKMTTSQQDKNLSGHEEFTHTGSVGEAPV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggggaagactgggcagagtacagtggacttaaattccccaacagaggtcaaacaagca
gttccctttgaagaaatggatcacatggcgccctctgcagaagaaaagaaaaaagaggag
ccacctgacagaggcagctggaagggcaaatttgatttcctgctgtcgtgcgtgggatac
gctataggcttaggaaatgtctggaggttcccttatctgtgtgggaagaatgggggagga
gctttcctgatcccatactttttgaccctggtgtttgctgggatacctctcttcctgctg
gagacatccctgggtcagttcacctcagtgggagggctaggggtgtggaagctcatccca
atgatgaaaggtgttggcctggctgcagtggtgctgtccttctggctcaacatctactat
attatcattatcgcctgggcactctactacttattcaactcctttgcttcggagctgcct
tggcaaagctgtgataacccctggaacacagagaactgcttttccaactacagtctgaca
gacaccaccaacttgaccagcgctgtcactgagttctgggagcggaacatgcatcagctg
tctggtggcctggaggagccgggagaggtacgctggcccttagtgggtactctggcgctg
gcctgggtccttgtctacttctcaatctggaaaggagtggagtggacggggaaggtggtg
tatttctcagccacctatccctacttcatgctgttcatcttgttcttccgaggggtcact
ctaccaggggccatagatgggatccgcttctacattacaccagacttcaataagctcatg
caatctgaggtgtggctggatgcagcaacccaaattttcttttcttatggactgggcctg
ggctcgctcatcgcactggggagctacaactcttacaacaatgatgtgtacaaggactcc
atcatagtgtgctgcattaactccttcaccagtatgtttgctggctttgtcatcttttcc
atcgtaggcttcatgtcctatatcactaagaaacctgttaaggaattagcagcatcaggt
ccaggactggcgtttttagcttatccccaagctgtcacgcagcttcccatgtcttctcta
tgggctatcctcttcttctccatgctcatgatgttaggcttggacagtcagttctgcact
gtggaaggcttcatcacagctctaatggatgaatatccactactgctgaggaagaggaag
aagatcttcatcctcattgtgtgcttaatctccttcgtcattggcttctcaaacatcaca
cagggtggcctgtacgtgttcaagctgtttgattactactctgccagtgggatgtgtctc
ctctacctcgtcttctttgaaacagtttccatatcctggttttatggagctgaaaggttc
tatcagaacattgaggacatgatcggctatcgaccatgtggctggtggaagctttgttgg
atgtttttcaccccaatgatctgcttgggggtgtttaccttcagtgccatcgagatgacc
cctctgagcttgggaaagtatgtgtacccattgtggggccaagtgattggctgggtcatg
gctatgtcctccatgatactgatccctggctacgtcatctacatgttctgcaccaccaaa
ggaagcatcaagcagcgttggcggaagatgactacttcccagcaggataaaaacctatcg
gggcatgaagaatttacacacacagggagtgttggtgaagctcctgtctag
DBGET
integrated database retrieval system
