Scomber japonicus (chub mackerel): 128353388
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Entry
128353388 CDS
T09718
Name
(RefSeq) peroxisome proliferator-activated receptor alpha-like isoform X1
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03320
PPAR signaling pathway
sjo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128353388
03320 PPAR signaling pathway
128353388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128353388
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128353388
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128353388
Nuclear receptors [BR:
sjo03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
128353388
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128353388
NCBI-ProteinID:
XP_053170052
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Position
23:10747470..10759866
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AA seq
478 aa
AA seq
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MAGDLYCPPSPLGDSLLDSPLCGDLMEDLRDISQSIGGDTLGFDFPEYQSTCSGSESSIT
LDTLTPASSPSSGVCGATLGPEEKFSPLSLECRVCSDKASGFHYGVHACEGCKGFFRRTI
RLKLEYDKCERNCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPQAEKLKLKAESKM
VEKEEASPMLSDHKFLVRQIHEAYMRNFNMNKAKARLILTGKTSKPQPFIIHDMETFQLA
EKTLAAHMVNSDYLESGSGLQAGDVVTALGCGELQQREAEARLFHCCQSTSVETVTELTE
FAKAVPGFQSLDLNDQVTLLKYGVYEALFTLLASCMNKDGLLVARGRGFITREFLKSLRR
PFSDMMEPKFQFATRFNSLELDDSDLALFVAAIICCGDRPGLVDVPLVEQLQESIIQALQ
LHLLANHPDNTFLFPRLLQKLADLRELVTEHAQLVQEIKTTEDTSLHPLLQEIYRDMY
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggatctctactgccccccatccccgctgggggattccctcctggacagcccg
ctgtgtggagacctgatggaggatcttcgtgacatctcgcagtccataggaggcgacaca
ctgggatttgatttcccagagtaccagagcacttgctcaggttcggagagctccatcaca
ctggacaccttgaccccggcctctagtccgtcgtcaggggtgtgtggagcaacgctaggc
cctgaggagaaattcagccccctcagcctggagtgcagagtgtgctcagacaaagcgtca
ggcttccactatggggtgcatgcctgtgagggctgtaagggtttcttcaggaggaccatc
cggctaaagcttgagtatgacaagtgtgaacgtaactgtaaaatccaaaagaagaaccgc
aacaagtgccagtactgccgattccacaagtgcctctctgtgggcatgtcccacaatgcc
atccggtttgggcggatgcctcaggcggagaaactgaagctcaaggcggaaagcaagatg
gtggagaaagaggaggcgagccccatgctgtctgaccacaagtttctggtgaggcagatc
catgaagcctacatgaggaacttcaacatgaacaaggcgaaagctcggctcatactcacc
ggaaagactagcaagccgcagccgttcatcatccacgacatggagacgttccagctagca
gagaagactttagcggcccatatggtaaacagtgactatttggagtccggcagcggcctt
caagctggggatgtagttacagctttggggtgtggggagctccagcagagggaggctgaa
gcaaggctcttccactgctgccagagcacctcagtggagacggtcacagagctgacggag
ttcgccaaggcagtaccgggtttccagagcctggatttaaatgatcaggtgactctcttg
aagtacggggtttacgaagctctcttcaccctcctggcctcttgcatgaacaaagacggc
ctcctggtggcgcgcggcagaggcttcatcacccgtgagttcctcaagagcctccggcgg
ccatttagtgatatgatggagcccaagttccagtttgccacacgcttcaattccctggag
cttgatgacagcgacctggccctttttgtggccgccattatctgctgcggagaccgtcca
ggcctggtggatgtgcctcttgtggagcagctgcaggagagcatcatccaggcgctacag
ctccacctcctggccaatcacccagacaacactttcctcttccccagactgttgcagaaa
cttgctgacctccgtgaactggttacagagcacgctcagttggtccaggaaatcaagacg
acagaagacacgtcactgcacccgctcctgcaagagatatacagggacatgtactga
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