Scomber japonicus (chub mackerel): 128353421
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Entry
128353421 CDS
T09718
Symbol
snd1
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
128353421
NCBI-ProteinID:
XP_053170093
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Position
23:16068898..16249016
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AA seq
911 aa
AA seq
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MASVSAPAQTAPSSAAPLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGSMAR
RAAQAQPDTKDTPDEPWAFQAREFLRKKLIGKEVCFTVEIKTALGREYGMVYLGRDTTGE
NIAESLVNEGFATVRREGIRGNNLEQARLCELEDQSKASKKGMWSEGGGTHTIRDLKYTI
ENPRNFVDSLHQKPINAIIEHVRDGSVVRALLLPDYYLVTVMLSGVKCPTFKREADGTES
PEPFAAEAKFFTESRLLQRDVQIILESCPNQIILGTILHPNGNITELLLKEGFARCVDWS
MAVYTQGAEKLRAAERSAKERRVRIWKDYVAPTANLDQKDRQFVAKVMQVVNADAMVVKL
NSGEYKTIHLSSIRPPRIEGEEKNKDKDKRFRPLYDIPYMFEAREFLRKKLIGKKVNVTV
DYIRAATGPGESTPAFSERTCATVTIGGINIAEALVSKGLATCIRYRQDDDQRSSHYDEL
LAAEARAIKNGKGLHSKKEVPIHRVADISGETQKAKQFLPFLQRAGRSEAVVEYVFSGSR
LKLYMPKETCLITFLLAGIECPRSSRNMPGGMQVAEPFSDEAMMFTKELVMQREVEVEVE
SMDKAGNFIGWLHIEGVNLSVALVENALSKVHFTAERSAYYKTLVSAEEGCRQRKEKVWA
NYEEKPVEEVVHLTEEKERVANYKPVYVTEITDTLHIYTQDVETGSQLESLMETMRAEIA
AQPPVEGSYAPRRGDYCIAKFADGEWYRARVEKVESPAKVHVFYIDYGNREVVSSTRLAA
IPPAFSTRTLPAQATEYAFGFIQVPQDEDARADVVDCVVRDIQNSQCLLNVEYPGATCPH
VTLQFGDTKDDVGLGLVKEGLVMVDVRKEKYLQKMVTEYLNSQESAKSARLNIWRYGDFR
ADDADEFGYNR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtttcggcaccagctcagacagccccttcttcggctgctcctctgcaaagg
ggaattgttaaaatggtcttgtcgggctgtgccattattgttcggggccagcctcgaggt
ggcccacccccggagcgtcagatcaatctcagtaacatccgagctgggtccatggcccgc
agagccgctcaggcccagcctgacaccaaggacacccctgatgagccatgggcctttcaa
gccagagagttcctgcggaagaagctaattggcaaagaggtgtgcttcactgtggaaatc
aaaactgctttgggcagggagtacggcatggtctacctggggagagacacaacaggggag
aacatcgctgagtctctggtgaacgagggctttgccacagtccgcagggaaggaatcaga
gggaacaatctagagcaggccagactctgtgaattggaggaccagtctaaggcatccaag
aagggcatgtggagtgagggcggcggcacacacaccatccgcgacctcaagtacaccata
gagaatccacgcaactttgtcgactccttgcaccagaaacctattaatgccatcatcgaa
cacgtgcgtgacggcagtgttgtccgtgcgttgctcctccccgactactacctggtcact
gtcatgctgtctggagtcaagtgtcccacattcaaacgggaagcagatggcacagagtcg
ccagagccgttcgcagcagaggccaaattcttcacagagtcacgtcttctgcaaagagat
gttcagatcatcttggaaagctgtcctaatcagatcatactgggcaccatccttcatccg
aatggcaacattacagaactcctgctgaaggaaggcttcgctcgctgtgtggactggtca
atggctgtctacacccagggagctgagaaactccgagctgctgaaagatccgctaaggag
cgcagggtccgcatctggaaggactacgtggcacccacagccaacttggatcagaaggac
agacaatttgtagccaaggtgatgcaggtggtcaacgctgatgccatggtggtcaagctg
aactctggagaatacaagaccatccacctgtccagcatccggcccccaagaattgaggga
gaggagaagaacaaggacaaagacaaacgcttccgtccactttacgacatcccctacatg
ttcgaagcccgcgagttcctgaggaagaagctcattggaaaaaaggtcaatgtgacagtg
gactacatcagagcagctactggtccaggagaaagcacccctgccttttcagaacgtacc
tgtgctacagtcacaattggtggcattaacatagccgaggctctggtcagtaaaggcctt
gctacgtgcatcagatacagacaggacgacgaccagcgctcctcccactacgacgagctg
cttgctgcagaggcacgggctatcaagaacggaaaagggctgcacagcaagaaggaggtt
ccaatccacagagtggctgatatctctggggagacacagaaagccaagcagttcttgccc
ttcctgcagagggccggtcggtcagaagctgtggtagaatacgtcttcagcggctcccgc
ctcaagctgtacatgcccaaagaaacctgcctcatcacattcctccttgctggtattgaa
tgtccacgcagttccaggaatatgccaggggggatgcaggtggctgagcccttcagtgac
gaggccatgatgttcaccaaagagctggtgatgcaaagagaggtggaagtggaagtggag
agcatggacaaagcagggaacttcattggctggctgcacatcgaaggtgtgaatctgtcg
gtggctttggtagaaaacgctctgtccaaggtccactttacagcagagcgcagcgcctac
tacaaaaccctggtttcagcagaggagggatgccgacagaggaaagagaaggtctgggcc
aactatgaggagaaaccagtcgaggaggttgtgcacctaacagaggagaaggaacgcgtg
gccaactacaaaccagtatacgtcactgaaatcaccgacaccctgcacatctacacccag
gacgttgagacaggaagccagttggagagtctgatggagactatgagggcagagatcgct
gcccagcctcctgtggaaggatcttacgccccacgccgaggggactactgcatagccaaa
tttgctgatggtgaatggtacagagccagagtggagaaagttgagtcaccggcaaaggtt
catgtcttctacatcgactacggcaacagagaagtggtgtcgtccacccgtcttgctgcc
ataccccctgccttcagcaccaggaccctgccagcacaggccacagagtatgccttcggc
ttcatccaggtcccacaggacgaggacgcccgcgctgacgtcgtagactgcgtggtgagg
gacattcagaacagccagtgcctgttgaacgtggaataccccggtgccacctgcccacat
gtcacactacagttcggggacaccaaggacgacgtgggcctcggcctggtcaaagagggc
ttggtcatggtggacgtccgcaaggaaaagtacctgcagaagatggtgacagaatacctg
aacagtcaagaatctgccaagagtgccaggctcaacatttggcgctacggagacttccgt
gcagatgacgccgatgagttcggttacaaccgttaa
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