Scomber japonicus (chub mackerel): 128353430
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Entry
128353430 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128353430
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128353430
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
NOD2_WH
SPRY
LRR_6
LRR_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
128353430
NCBI-ProteinID:
XP_053170107
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All DBs
Position
23:4450110..4455689
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AA seq
922 aa
AA seq
DB search
MKQEVLADCLLSRSPAGCQHKLKSNLQKKFECLFEGIAKAGNPTLLNQIYTPLYITEGGT
AEINDEHEVRQIQTAFRKPVRPETTIRHEEIFKASPGRDEPIRTVMTKGVAGIGKTVLTQ
KFTLDWAEDKANQDIHFTFPFTFRELNVVKEKKYSLVELVHHFFTETKEAGICRFEEFQV
AFIFDGLDECRLPLDFHNNKILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQ
IPPECVSMVTEVRGFTDPQKEEYFSKRFRDKKQASTIISHIETSRSLHIMCHIPVFCWIT
ATVQEDVLKNREGGELPKTLTEMYIHFLVVQAKLKYIKYDGGAETDPHWSQENRKMIESL
GKLAFEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFKEESGLYQDKVFCFVHLSI
QEFLAALHVHLTFIKSGVNLLAEEQTTSQKSETKQESAETQLYQSAVDEALKSPNGHLDL
FLRFLLGLSLQTNQTLLRGLLTQTGSSSQTNQETVEYIKKKISENLSAERSINLFHCLNE
LNDRSLVEEVQQYLRSVRLSAAKLSPAQWSALVFILLSSEKDLDVFDLKKYSASDEALLR
LLPVVKASNKALLSGCNLSEKSCAALSSVLSSQSSSLRELDLSNNNLQDSGVKQLSAGLE
SPHCELETLSLSGCLITEKGGASLASALSLNPSHLRELDLSYNHPGDSGEKLLSAGLDTL
SLQPAGVRWLTPGLTKYSCELTLDPNTVHRKLKLSDNNRKVTYVKEDQSYPDLPDRFDHW
PQLLCSNELTGRCYWEVEWSGGVHMAVSYRGISRKGDIADSAFGPNDQSWCLDCSDDYGC
SVRHGNRSTSLSDSSFTVSHRVAVYVDCPAGTLSFYRVSSDTLTHLHTFNTTFTQPLYAG
FGFRFGWSDSSFLLSEKPSSVI
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggaggtgctggctgactgtctgctgagcagaagtcctgcaggttgtcagcat
aaactcaagtctaacctgcagaagaagtttgagtgtctgtttgaggggattgctaaagca
ggaaacccaacgcttttgaatcagatctacacaccgctctacatcacagagggagggact
gcagagatcaatgatgaacatgaggtcagacagattcaaacagctttcaggaaaccagtc
agaccagaaacaacaatcagacatgaagaaatctttaaagcctcacctggaagagatgaa
ccaatcaggacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacag
aagttcactctggactgggctgaagacaaagctaaccaggacatacacttcacatttcca
ttcactttcagagagctgaatgtggtgaaagagaaaaagtacagcttggtggaacttgtc
catcacttctttactgaaactaaagaagcaggaatctgcaggtttgaagagttccaggtt
gcgttcatctttgatggtctggatgagtgtcgacttcctctggacttccacaacaataag
atcctgactgatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcagg
gggaaactgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcag
atccctcctgagtgtgtcagtatggtgacagaggtcagagggttcactgacccacagaag
gaggagtacttcagtaagagattcagagataagaaacaggccagcaccatcatctcccac
atcgagacatcacgaagcctccacatcatgtgccacattccagtcttctgctggatcact
gctacagttcaggaggatgtgttgaaaaacagagagggaggagagctgcccaagaccctg
actgagatgtacatccacttcctggtggttcaggctaaactgaagtacattaagtatgat
ggaggagctgagacagatccacactggagtcaagagaacaggaagatgattgagtctctg
ggaaaactggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctg
acagagtgtggcatcgatataagagcagcctcagtgtactcaggagtgttcacacaggtc
tttaaagaggagagtgggctgtaccaggacaaggtgttctgctttgtccatctgagcatt
caggagtttctggctgctcttcatgtccatctgacattcatcaagtctggagtgaatctg
ctggcagaagaacaaacaacatcccagaagtctgaaactaaacaagaatctgcagagaca
cagctctaccagagtgctgtggacgaggccttaaagagtccaaatggacacctggacttg
ttcctccgcttcctcctgggtctttcactgcaaaccaatcagactctcctacgaggtctg
ctgacacagacaggaagtagctcacagaccaatcaggaaacagtcgagtacatcaagaag
aagatcagtgagaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaa
ctgaatgatcgttctctggtggaggaggtccaacagtatctgagatcagtaagactctcc
gcagctaaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaa
aaagatctggacgtgtttgacctgaagaaatactctgcttcagatgaggctcttctgagg
ctgctgccagtggtcaaagcctccaacaaagctctgttgagtggctgtaacctctcagag
aaaagctgtgcagctctgtcttcagttctcagctcccagtcctctagtctgagagagctg
gacctgagtaacaacaacctgcaggattcaggagtgaagcagctttctgctggactggag
agtccacactgtgaactggaaactctcagtctgtcaggatgtctgatcacagagaaaggt
ggtgcttctctggcctcagctctgagcctcaacccctcccatctgagagagctggacctg
agctacaatcatccaggagactcaggagagaagctgctgtctgctggactggacactctc
agcctgcagcctgctggagtccgatggttgacaccaggtctgacgaagtattcctgtgaa
ctcacactggatccaaacacagtacatagaaaactcaaactgtctgacaacaacaggaag
gtgacatatgtgaaggaggatcagtcatatcctgatcttccagacagatttgatcactgg
cctcagctgctgtgtagtaatgaactgactggtcgttgttactgggaggtcgaatggagt
ggaggggttcacatggcagtgagttacagaggaatcagcaggaaaggagacattgctgac
tctgcgtttggaccgaatgatcaatcctggtgtctggactgctctgatgattatggttgc
tctgtccgtcacggtaacagatcaacatccctctcagactcctccttcactgtctctcac
agagtagcagtgtatgtggactgtcctgctggcactctgtccttctacagagtctcctct
gacacactgacccacctccacaccttcaacaccacattcactcagcctctgtatgctggg
tttgggttcaggtttggttggtctgactcctcattcctcctgtcagagaaaccttctagt
gttatttag
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