Scomber japonicus (chub mackerel): 128353473
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Entry
128353473 CDS
T09718
Symbol
snrpf
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128353473 (snrpf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128353473 (snrpf)
03041 Spliceosome [BR:
sjo03041
]
128353473 (snrpf)
03032 DNA replication proteins [BR:
sjo03032
]
128353473 (snrpf)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
128353473 (snrpf)
Spliceosome [BR:
sjo03041
]
Complex A
U1 snRNP components
Sm proteins
128353473 (snrpf)
U2 snRNP components
128353473 (snrpf)
Complex B
U1 snRNP components
128353473 (snrpf)
U4/U6.U5 tri-snRNP components
128353473 (snrpf)
Complex C
U2 snRNP components
128353473 (snrpf)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
128353473 (snrpf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
128353473
NCBI-ProteinID:
XP_053170151
LinkDB
All DBs
Position
23:complement(19873973..19876798)
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYVDGALAGHLG
EVLVRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccgctgaacccaaagccattcctgaacggccttacaggcaaaccagtgatg
gtgaaactgaagtggggtatggagtacaagggctacctggtgtcagtggacggatacatg
aatatgcagctggcaaacacagaagaatacgttgatggagcgttggcaggtcaccttggt
gaggtgcttgtcaggtgcaataacgttttgtacatcagaggcgtagaagaagaggaagag
gacggagaaatgagagagtga
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