Scomber japonicus (chub mackerel): 128353478
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Entry
128353478 CDS
T09718
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128353478
04121 Ubiquitin system [BR:
sjo04121
]
128353478
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128353478
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128353478
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Motif
Other DBs
NCBI-GeneID:
128353478
NCBI-ProteinID:
XP_053170155
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Position
23:complement(603922..606656)
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AA seq
601 aa
AA seq
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MNPSQKLVCNAINWPRTLSVAFRHLANQMQPWTLGPCMRTPGVTKMAEAGGEHARDAEET
LVPKTNSTSAIWQYFGFKKEDNLQSQVLCRTCRAVVATSRGNTTNLHHHLLHHHKELHEQ
FKASQSRAPSSSKATRPSLQQQSIAQSFVRLTPYEKSSKRHIEITEAITHCLAKDMMPTN
TVTRPGFLSLVHKLDRRYEVPSRTYFSDVAIPNLYEKCRTTVESELDQVEYFACTTDLWS
SRTTEPYISLTVHFLDREFQLKTRCLQTQYFPGEHTGENIAYGLREALTSWHLGEEQLTC
VTTDNGANVVKAIELNHWVRLQCFGHRLHLAIENALKDDRRIARATGLCKKMVGHFSHSW
KQKTALRRAQQKHNLPEHALVTECPTRWGSKQKMMGRILEQQRALSDVLSADRKTRHLDP
SWQDLETSVLAGKEGDTDLTKDIKFKSSYISVEKVQDIKTRVMSEMKDTSQKEGEDSQAK
SVNPPIDKRAKPSLGSLLKSNPGPTSTTFDMQMEQAIEAEVNSYLLSPTIDSEADPLTWW
KLHHLTYPKLSKLARRYLCIPATSSPSERLFSTSGNVVTCQRACLKPTKVNMLVFLAKNL
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaacccatcgcaaaagctggtctgtaatgcgataaattggccacgcacactcagcgtg
gcattccgacatttggccaatcagatgcagccctggacactcgggccatgcatgcgcaca
cctggagtgacgaagatggcggaggcaggaggagagcatgcgagggatgcggaggaaacg
cttgtgccaaaaacaaatagcacctctgctatttggcagtacttcggattcaaaaaagaa
gacaacctacagagtcaggtattgtgcaggacctgcagggcggttgttgcaacatccaga
ggtaacaccaccaacctccatcaccacctgctgcaccaccataaagagctgcacgagcag
ttcaaggccagtcaatcgagagcgcctagcagcagtaaagcaacgcgaccatcactgcag
caacagtccattgctcagagttttgtgagactgactccatatgaaaagtcctctaaacga
cacattgaaataacagaggccataacccactgtttggcgaaggatatgatgcccactaac
accgtgaccagacccggatttctgagtctagttcacaaactcgatcgacgatatgaggtg
ccatcacggacttatttttctgatgttgctattccaaatctgtatgaaaagtgcaggacg
acggtggagtcggagctggaccaggtcgagtactttgcctgcaccacagacctctggtcc
agccgaaccacagagccctacatcagtctcactgtacactttttggaccgggaatttcag
ctgaaaacacggtgtctccagacacagtattttccaggagaacacaccggcgagaacatt
gcttatgggttacgtgaagctttgaccagctggcatctcggagaggagcaactaacctgt
gtgaccactgacaacggagcaaatgttgttaaggccatcgagcttaaccactgggtcaga
ctacagtgttttgggcaccggctgcatctcgctatcgaaaatgctcttaaagatgacagg
cgcattgcccgtgctactgggctgtgcaaaaaaatggtgggacatttctcccacagttgg
aagcagaagacagctctcaggagagcacaacagaagcacaaccttccagagcatgccctt
gtcactgaatgcccaaccaggtggggctcaaaacagaaaatgatggggaggatcttggag
cagcagcgggccttatctgatgtcctctcagcagaccgaaaaacacggcatctggatccc
tcctggcaagacctggagacatcagttcttgcaggaaaagaaggtgacacagatttgaca
aaggatatcaagttcaagagcagctacatcagtgtcgagaaggtccaagacatcaagacc
agggtgatgtcggagatgaaggatacatcgcagaaggagggagaagattctcaggccaaa
agtgtaaatccacccatcgacaagagggcaaaaccatcactgggcagtttgctcaaaagt
aatccaggtccaacctccaccacattcgacatgcagatggagcaagctattgaagctgaa
gtcaacagctacctactgtcccccaccattgacagtgaggcagacccgttgacttggtgg
aaactccaccacttgacttacccgaagctgagtaaactagctcggcggtatctgtgtata
cctgccactagctcaccctcagagaggctctttagcacatcagggaacgtggtaacatgt
cagcgtgcatgtttgaaacctaccaaagttaacatgttggtgttcttggctaagaacttg
ccctga
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