Scomber japonicus (chub mackerel): 128353488
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Entry
128353488 CDS
T09718
Symbol
kera
Name
(RefSeq) keratocan
KO
K08123
keratocan
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sjo00535
]
128353488 (kera)
Proteoglycans [BR:
sjo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
128353488 (kera)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_6
LRR_9
Motif
Other DBs
NCBI-GeneID:
128353488
NCBI-ProteinID:
XP_053170165
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Position
23:16762265..16763424
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AA seq
343 aa
AA seq
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MAPLLSLFCILYLVGPVLSQDMPYEEYMAQLQACPKECRCPPNFPRAVYCDNKGLTSIPK
IPTHTWYLYLQNNLIEGLSAESLRNATQLRWLNLNRNKITSEGVEVGALNAMPHLAHLYM
DDNLLSSVPSPLPASLEHLRLSRNRISKIPAGIFQGLDKLNLLDLQGNKLMDDAVTEVSL
KGLSSLVQINLAKNQLSNMPLGLPPTTTQLFLDGNNIEKIPAGYFKGLPKMAFLRLNHNK
LESSGVPKNVFNVSSMLDLQLSHNQLTEVPLIPSGLEHLLLDHNKIKSVSGSTVCPVAVE
AVDDSVNDSVPRLRYLRLDGNDIKPPIPRDVILCFRLLRSIVI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcttttgagtcttttctgcatcttgtacctggtcgggccagttctcagccag
gacatgccttatgaggaatatatggcccaactccaagcttgccctaaagagtgtcgctgc
ccccccaactttcctcgtgctgtctactgtgacaataaaggcctgacgagcatccccaaa
attcctacacacacatggtatctctacctgcagaacaatctgattgaagggctgtctgca
gaatccttgcgtaatgccacacagttgcgctggctgaacctgaaccgcaacaaaatcact
agtgagggagtggaagtaggtgcactgaatgcaatgcctcacctggcccacctgtacatg
gatgacaacctcttgtcttctgtgccatctcccctgcctgccagcctggagcatctacgc
ctctctcgcaatcgcatctccaagattcctgctggcatcttccaaggtctggataagcta
aacctcttggacctccaggggaacaagctgatggatgatgcagtgacggaagtgagtctt
aagggtctaagcagtctggtacaaatcaatctagcaaagaaccagctgagtaacatgcct
cttggcctaccacccaccaccactcagcttttccttgatggcaataacattgagaagatc
cctgctggctatttcaaaggattgcctaaaatggcatttctcaggctcaaccacaataag
cttgaaagcagtggagttcccaaaaatgtttttaacgtctccagcatgttggacttgcag
ctgtcccacaaccagctgaccgaggtgcccctcattccctcaggccttgagcaccttctt
ctcgaccacaacaagatcaagagtgtaagtggctccaccgtctgtcctgttgccgttgaa
gctgtggatgactctgtgaatgacagtgttcctcgactgcgctacctccgactggatggc
aatgacattaagccaccaattcccagagatgtgattctgtgcttccgtctccttaggtcc
attgtcatctaa
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