Scomber japonicus (chub mackerel): 128353493
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Entry
128353493 CDS
T09718
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128353493
04121 Ubiquitin system [BR:
sjo04121
]
128353493
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128353493
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128353493
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
zf-C2H2_12
Yop-YscD_ppl_3rd
Motif
Other DBs
NCBI-GeneID:
128353493
NCBI-ProteinID:
XP_053170169
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All DBs
Position
23:complement(1467663..1470074)
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AA seq
526 aa
AA seq
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MELVSKPNATAAVWEHFGFKQNARGEPLNVSESVCRICWKTVAIKSGNTTNMHMHLKHNH
PLQFSQLGKKNTTSGPFSSSRQSTVTGAFSRQTKSKQDSTKWCTLTDSVVRFIAKEMQPF
SIVEKPAFQRMLQTFDRQYELPGRTYVSQTAIPQLYNSVKDDILKEIKDIQFYSATTDMW
SSSNMTPYMSLTIHYITADWTLQSKCLETRYVPDNYTADTLEENLKSALADWGLDEHKLV
CITTDNGANIVAAIRNLGWPWLNCFGHNLHLAVSHGLDSNKDRTARAIGLCKSLVNAFNL
SWLKRRDLRKAQSEANLPQHSLILDVVTRWGTKQKMEQLPAMIKDDLLSPGPDDTALTAS
IKQNMCRVLTEKYSSPAIQVLLRKATILDPRYRGSMEEAGALDDAKQQLVEELLDLGPEG
EGTSGESCSTTAEGNKDEPTAAAPTKKKRLSDLLQNRRVHLTSQAQAAFPKRVQADAELT
KFLQEDALDASCDPLMWWRDNQKRYPLMAKLAQKYMCNKHQLRENV
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggaattggtttctaagccaaacgccacagctgcagtgtgggagcatttcggattcaaa
cagaatgcccgtggtgaaccactgaatgtgagcgagtcggtgtgtcgcatttgttggaaa
acagtcgcaattaaaagcggcaacacaacaaacatgcatatgcatctaaaacacaatcat
ccgctgcagttttcccagttggggaaaaaaaacacaacaagtgggccgttttcctcttcc
cgacagagcacagtcactggggcgtttagtcgacaaacaaagtccaaacaggacagtacg
aaatggtgtacactcacagacagtgtagttcgcttcattgctaaagagatgcagcccttt
agcatcgtcgaaaagccagcatttcaacgaatgctgcaaacatttgacagacagtatgaa
ttgcctgggagaacatacgtgtcacaaacggcaattccacaactgtacaacagcgtgaaa
gacgacatacttaaggagatcaaagacatccaattttactctgccactacagatatgtgg
tcaagttcaaacatgaccccgtatatgagcttgactatacactacataactgctgactgg
actctgcagtccaagtgtttagagaccagatatgtcccagataactatactgctgacacc
ctggaagaaaacctgaagtctgctttagcagactggggactggatgagcacaaactagtc
tgcatcactacagacaatggtgctaacattgttgctgcaataagaaatcttggctggcca
tggcttaattgttttggccacaacctccatctcgctgtgtcccatggtctggacagcaac
aaagatcggacagctcgtgccataggactctgtaaaagtttggtcaacgcattcaacctg
agctggcttaagaggagagacctgaggaaggcacagagtgaggccaatctcccccaacac
agtctaatactggatgttgtcacacgatggggcactaagcagaagatggagcaactccca
gccatgattaaagacgaccttctctctccaggccctgatgatactgcactgacagccagt
attaaacaaaacatgtgcagggtactgactgaaaaatacagctcacctgcaattcaagtc
ctccttagaaaggccaccatcttggatcccagatatcgtggcagcatggaggaggcaggt
gcattggatgatgccaaacaacagcttgtggaagagctactggacttaggaccagaagga
gaaggtactagtggtgagagctgcagcacaaccgctgaaggaaacaaggatgaacctact
gctgctgcacccaccaagaagaagaggctgagtgaccttcttcaaaacagaagagttcat
ctcacaagtcaggcccaggctgcatttcccaaaagagtgcaggctgatgcagagctgacc
aagttcctccaagaagatgcacttgatgcatcttgtgatcccttgatgtggtggcgtgac
aatcaaaaaagatatcctttgatggccaagttggcccaaaaatacatgtgcaacaagcac
cagctcagagagaatgtttag
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