Scomber japonicus (chub mackerel): 128353503
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Entry
128353503 CDS
T09718
Symbol
caprin2
Name
(RefSeq) caprin-2
KO
K18744
caprin-2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128353503 (caprin2)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
128353503 (caprin2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
128353503
NCBI-ProteinID:
XP_053170176
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Position
23:complement(4396951..4412096)
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AA seq
919 aa
AA seq
DB search
MVQLSPSPTLDVTPPPERSEEGEERQDDLVMAGGPKMGSPGGLSALQLSLEVSTIYHGYE
TYIEDGLICLKHKVRNLEKKKLKLEDYKKRLNQGEALNKDQMMAVEKYDEVVHNLGFARE
LHKTLDGLTQNLLRAQKKVEKKEQVAKGETERRRLSMVLQVQHLFTSLQQEHVRRDLLAG
HNQAPRISAQQLHSLSQLAGLLGVKRDNRLSLEAQMEQAALVYLDLLEGKDKPVAGSTFK
LLKDELTRLLNCKYFSCLPPPPKKTQEVSLSSTSHSTISNSKPNEVSKEFFNRLYLSDME
TPPTQNWKEDFQAMREQEPPDSWDMELPDGTASPPTAVHKPWRGAATFIPKVPVTAKIQS
ADGKRRKERKAKGEQNAKTAHHMEIPVEVFNSPSTLPKDPILRKQYLEDLMTKIHGSFSF
MQDSLLDGESSPTNSHPRLKRRPSGSPSPLGQRDLRSPVDILPKTMHSTPLPARLVERKA
SLRNGDQCLETCDLELSPKELPHEPLQITERKTFPSPPLYCRESAIPVSLEDKSRPCTPV
TESGKQSPCNGVSSCTSTPPQAQSFSTPPTRRTLSSAQFQSIQSVFKVNSTSPQNGEINF
KPDTAVFAEPRYSTASTQTPPEFAPSDDEPQTAYQSDYTVGNGGQIFLSPGQSGGGAGRS
GQSYYSRGSVRGMARGGKGLAHSFRSSGWYRGGAFIPQAHLRDSGPLLYTARDYQHSYRR
GGGRHNPSAWSDSSQVSSPDREGAFTIVDSGHGDSLSVSTMEVPLTPHSHHHHTTLLPMQ
LYPLSQPLRVAFTASRTANFAPGNLDQPIVFDQLHSNLGEMYDTHIGRFTSPVNGTYVFI
FHILKLAINVPLYINLMRNDEVMVSAYANDGAPDHETASNHAILPLFQGDQVWLRLHRGA
IYGSTWKYSTFSGFLLYQD
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccttcccctaccttggatgtcacccccccacctgagcgctctgaa
gagggggaggaaagacaagacgacctggtgatggctggtggcccgaaaatgggctcgccc
ggcgggctgagcgccctgcagctcagcctggaggtctccactatctaccatggctatgaa
acatacatagaggatggtctcatctgcctcaaacacaaggtccgcaacctggagaaaaag
aagctgaaactggaggactataagaagaggctgaaccagggcgaggcactaaacaaagat
cagatgatggctgtggaaaagtacgacgaggtggtgcataacctgggatttgcacgggag
ttacacaaaaccctggatggtttaactcagaatctgctgagggcccagaagaaggttgag
aagaaggagcaggtggctaagggggagacggagagaagacggctgagcatggtgctccag
gtccagcacctcttcaccagcctgcagcaggagcacgtcaggagagacctgctggccgga
cacaaccaggcacctcgcatttcagcccagcagctgcacagcctgagccagcttgcaggc
ctgctgggagtcaagagggataacagactgagtttagaggcgcagatggagcaggcggct
ctggtctatttggacctgctagaggggaaagacaagccagtggctggatccacatttaag
ctgctgaaagatgagctcaccaggctgctgaactgcaagtacttcagttgtcttccacct
ccacccaagaagactcaagaggtgtcgctgagctcaaccagccacagcaccatatcaaac
tccaaaccaaatgaagtttctaaggagtttttcaacagactgtacctgtctgacatggag
actcctcccactcagaactggaaggaggatttccaggccatgagggagcaggagccacct
gacagctgggatatggagctcccagatggaactgcttcaccaccaaccgcagtccacaaa
ccatggagaggagcagccactttcatccccaaagtccctgttaccgccaagatacagtct
gctgatggcaaacggagaaaagagagaaaagccaaaggagagcaaaacgccaagacggca
catcacatggaaataccggtagaggttttcaactccccatctaccttgcccaaagacccc
atcctgagaaagcagtacctcgaggacctcatgacaaagatccatggttcctttagtttc
atgcaggattctcttctggatggtgagagctccccaactaatagccaccccagattgaag
agacggccgtctggatctccatctcctttgggtcagagagacttgaggagcccagttgat
atcctgcccaaaacaatgcattccacgccactgcctgccaggcttgtagagagaaaagcc
agtctgaggaatggagatcagtgcctggagacctgtgacctggagctatccccaaaggaa
ctacctcatgagccgctgcagataactgaacgaaagacgtttccttcgccgccgctgtac
tgcagggagtctgccatacctgtcagtctggaggacaagagccgcccttgtaccccagta
actgagtcagggaagcagtccccctgtaacggggtgtcatcttgcacctccacccctcct
caggcacagtctttctccacacctcccaccagacgaactctctcctctgcacagtttcag
agcatccagtcagtcttcaaggtgaattccacctcaccccaaaatggggaaataaacttc
aaaccagatactgcagtttttgctgagcccaggtacagcactgctagcacccaaacacct
cctgagttcgctccttcagatgacgaaccacagacggcataccagtcagattatacggtg
ggtaatggtggacagatcttcctgtcccctggccagtcaggtggaggcgcgggtcgatcc
ggccagtcctactacagcagaggatctgtgagaggtatggcacgtggtggcaagggactg
gcacactcctttcgctcttctggttggtatcgaggaggagccttcatcccccaggctcat
ctcagggactctggcccgctgctatatactgcaagagactaccaacacagctacaggcgt
ggaggagggagacataaccccagtgcctggagtgattcctcccaggtgagcagcccagac
cgggagggagccttcacaatcgtggactctggtcacggggattccctgtcagtctccacc
atggaggtcccgctcaccccccacagccaccaccaccacaccaccttgctccccatgcag
ctttacccgctctcccagccgctgcgcgtggccttcaccgcctcccgcaccgcaaatttc
gccccgggcaacctggaccagcccatcgtgttcgaccagctgcacagcaacctgggcgag
atgtatgacacccacatcggccgtttcacctccccggtgaacggcacctacgtcttcatt
ttccacatcctgaagctcgccatcaacgtgccgctctacatcaacctcatgcgcaatgac
gaggtgatggtgtcggcgtacgccaacgacggtgcgccggatcacgagacggccagcaac
cacgccatcctgcctctcttccagggagaccaagtgtggctcaggttgcatcgtggcgct
atctacggcagcacctggaagtacagcaccttctccggctttctgctgtaccaggactga
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