Scomber japonicus (chub mackerel): 128353520
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Entry
128353520 CDS
T09718
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128353520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128353520
Transporters [BR:
sjo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128353520
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Motif
Pfam:
SNF
DUF7136
Motif
Other DBs
NCBI-GeneID:
128353520
NCBI-ProteinID:
XP_053170192
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Position
23:complement(10623567..10630355)
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AA seq
572 aa
AA seq
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MEERGQWSNKIEFILSVAGSIIGLGNMWRFPYLCYKNGGGAFLIPYLIFLFACGVPVFFL
ETALGQYTSQGGITCWRKISPLFEGLGYGTQVIVTLLNFYYIIVLAWGIFYLSFSFTWDL
AWSSCNNTWNTENCMEFERRNNSISQNMNFTSPVMEFWERRALRISPGIDHMGSLNWDLA
LCLFIAWIMCYFCIWKGVKSTGKVVYFTATFPYVMLIVLLIRGLTLPGATIGIKFYLYPD
LGRLADPQVWMDAGTQIFFSYAICLGSLTALGSYNKYNNNCYNGTSFVAGFAIFSILGFM
SYEQNVPISEVAESGPGLAFIAYPRAVSMMPFSPLWASLFFIMIVFLGLDSQFVCVESLV
TAIVDMYPAVFRRKNRRELFLLALSLFSFFMGLIMLMEGGMYVFQLFDYYAASGMCLLFM
AIFETVCIAWVYGADRFYDNIEDMIGYRPGPYIKYCWLFFTPATCIGTFAFSLIKYTPLK
YNNEYVYPWWGYVIGWLLALSSMLCIPFWMVYKISITKGTLRERIRVLITPADDLPKTKR
EQERLLAIFTPEGDATMNKNGYFPVSERDSNL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcggggccagtggagcaacaagatagaatttatcctgtctgttgctggctcc
atcattggcctgggcaacatgtggcgcttcccttacctctgctacaagaacggaggaggt
gcgttcctcatcccgtatctcatcttcctgtttgcctgtggtgttcctgtcttcttcctg
gagacagccctgggccagtacaccagccagggaggcattacctgctggaggaaaatcagt
cccttgtttgaaggtcttggctacggtacccaggtgatagtgactctgctgaacttctac
tacatcattgttctggcttgggggattttctacctgtctttctctttcacttgggacttg
gcctggtcttcctgcaacaacacatggaacactgaaaactgtatggagtttgagaggaga
aacaactccatcagtcaaaatatgaacttcacctctcctgtcatggagttctgggagaga
agagcactgaggatttccccaggcattgaccacatgggctctctgaactgggacctggcc
ttgtgtctgttcatcgcctggatcatgtgctacttctgcatctggaagggggtgaaatct
acaggaaaggtggtctacttcactgcgaccttcccatatgtgatgctgattgtgctgctg
atcagagggctcaccctgcctggtgccaccatcggcattaagttttacctttaccctgac
ctgggacgactggcggatccacaggtgtggatggatgctggcacccaaatcttcttctcc
tacgccatctgtttagggtcgctgactgctcttggaagctacaacaaatacaacaataac
tgctacaatggcaccagttttgtggcaggctttgcaatcttctccatcctgggtttcatg
tcttatgaacagaatgttcccatctcagaagtggcagaatctggtcctggcctagccttc
atagcttacccccgtgctgtgagcatgatgcctttctctcctctgtgggcctccctcttc
ttcatcatgatcgtttttctgggacttgacagccagtttgtgtgcgtagagagccttgtg
acggccatagtcgacatgtaccctgctgtgttccgccgcaaaaaccgcagggagctcttc
ctcttggctctgtccctcttttccttctttatgggtctcatcatgctgatggagggcggc
atgtatgtcttccagctcttcgattactacgcagctagtggcatgtgtcttctcttcatg
gccatctttgagactgtctgcattgcatgggtctatggtgcagaccgcttttatgacaac
atcgaggacatgattggctaccgtccaggaccttacatcaagtactgttggttgttcttc
accccagccacatgcattggtacttttgccttctccctcatcaaatacactccgctaaaa
tacaacaatgagtatgtgtatccgtggtgggggtatgtcattggctggctgctcgctctg
tcctccatgctctgcattcccttttggatggtgtacaagatcagcatcactaaggggaca
ctcagagagcgcatccgggtgctcatcacaccagctgatgacttacccaaaaccaagagg
gagcaagagaggttactggccatctttactccagagggagatgccaccatgaataaaaat
ggctactttcctgtctcagagagggactccaacttatga
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