Scomber japonicus (chub mackerel): 128354006
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Entry
128354006 CDS
T09718
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128354006
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128354006
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128354006
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Glycoprotein
Motif
Other DBs
NCBI-GeneID:
128354006
NCBI-ProteinID:
XP_053170230
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All DBs
Position
24:4824579..4831975
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AA seq
554 aa
AA seq
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MEPKIDLTPTSATAALSCWILISCVLAEDWARVHTEDELFRSLFGGYSKWSRPARNVTDV
VIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWTDYKLQWSPSDFDNLTSIRVPSELIWVP
DIVLYNNADGEFAVTHMTKAQLFHTGRVRWVPPAIYKSSCSIDVTFFPFDQQSCKMKFGS
WTYDRAKIDLEPFETTVDLKDYWESGEWAIVNAVGTYNTKKYDCCHEIYPDITYYFIIRR
LPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSL
VIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSSATHTMPRWVRRLFLSAVPRWLCMKRP
HHGLGPVRTDKLLPVHTPGRSRSASIWITQESDVDLHSYQDDNRCHSSPQLDSLDAGGEI
HYCDHRHYPNTDGFTRFGMKIAGRSRVSSPQVIGCTLLPQRQSSLSLDWNIPSLERGSIQ
SPLTSALSPAVISALEGVTYIAEHLRAEDADFSVKEDWKYVAMVVDRIFLWMFIIVCLLG
TVGLFLPPWLSGMI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagcctaaaatagatctgacaccgacttcagcgaccgccgcgctttcttgctggatc
ctcatcagctgcgtgttggctgaagactgggctcgtgtccacactgaggacgagctcttc
aggagtttgtttgggggctacagcaagtggtctcgtccagctcgcaatgtcaccgacgtg
gtcatcgttaagtttggcctgtccatcgcacagctgatagacgtggacgagaaaaatcag
atgatgacgaccaacgtgtggctgaaacaggaatggacagattataaactgcagtggagt
ccctctgattttgacaacttgacgtccatcagagttccttctgagctcatctgggttccc
gacatcgtgctgtataacaatgccgatggagagtttgctgtcacccacatgaccaaggcc
cagctgtttcacaccggtcgggttcgttgggtgcccccggccatctacaagtcctcctgc
tccatcgatgtcaccttcttccccttcgaccaacagagctgcaagatgaagttcgggtct
tggacgtacgaccgtgctaagatcgacctggagccctttgagaccaccgtggacctgaag
gattactgggagagcggagagtgggcgattgtcaacgcggtcggcacctacaacaccaag
aaatatgattgctgccacgagatctaccctgacatcacctactacttcatcatccgccgc
ctcccgttgttctacaccatcaacctcatcatcccctgcctcctcatctcctgcctaacc
gtcctggtcttctacctgccgtcggactgcggcgagaaaatcacgctgtgcatctccgtg
cttctgtcgctcaccgtcttcctgctgctcatcacagagatcatcccgtccacgtcgctg
gtcataccgctgatcggagagtacctgctcttcaccatgattttcgtcaccctgtccatc
gtcatcaccgtgttcgtgctgaatgtgcatcaccggtcgtcggccactcacaccatgcct
cgatgggttcggaggctgttcctatcggcggtgccacgttggctgtgcatgaagcgtcca
catcatgggcttgggcctgtaaggactgataaactcctcccagttcatactccaggccgc
tcccgcagcgcctccatctggatcactcaggagtctgatgtcgatctccatagttaccag
gatgacaaccgttgccacagtagcccccagctcgactccctggatgcgggaggtgaaatt
cactactgcgaccaccgccattacccaaacacagatggtttcacaaggtttgggatgaag
atagcaggacggtcgagggtgtcgtcgcctcaagtgatcggttgtactctcctcccgcaa
agacagtcttcactcagcttggactggaacatcccgtctttggaacgtggttcaatccag
agcccgttaacctctgccctgtctcctgcagtgatatcggccctggagggggttacctac
atcgcagagcatctgagagcagaggacgcagacttttcagtgaaggaggactggaagtat
gtcgccatggttgtggaccggatcttcctgtggatgtttattattgtgtgtctgctgggg
acagtcggactcttcctgcctccgtggctctctgggatgatttag
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