Scomber japonicus (chub mackerel): 128354098
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Entry
128354098 CDS
T09718
Symbol
als2b
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128354098 (als2b)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
128354098 (als2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
PH
Tudor_2
Motif
Other DBs
NCBI-GeneID:
128354098
NCBI-ProteinID:
XP_053170323
LinkDB
All DBs
Position
24:complement(4800909..4820087)
Genome browser
AA seq
1687 aa
AA seq
DB search
METQRKSSVDDGGGERGLLHTWRGYSYSVTPDRLLLPRPVLQVALGTRHGVLLVEGGQVY
SFGELPWKQSQVPEVAKPTLESALSGQRVVAVAAGSFHSGAITEDGGVHMWGDNGAGQCG
LSGLTSVPNPTPVALLDSDSSPPQTVPVLELACGEQHTLALSVQREVWAWGSGCQLGLNV
SVFPVWKPQKVEHLAGRYVLQVACGASHSLALVRCLGPLDVHRPPVDKCGQCNQLLYTMT
DKEDHVIISDSHYCPLGVELTEDESRLEAPTQTQGLKTSPSEPVLPSHTSTSGPANNSDA
SHTQDSEKGESSLTNGVPPGSDSDPSAQSAEGSGGAVAGVKNSPYPDEQAVKEYLRKLSD
TSQAEHMVKAGGLHSLLPSTGRETGSALNNLVASCASAVGERVASTYEALSLKKMMNFYL
PSGASRSGGPAGITGAAVNDNTTERVRQEDSVQTKKSSSTGDIREEEAEGLRRRLSLPGL
LSQGRYAVHLLSSSYNLLLSPRLLRKAHRPKMRAVALTPLGGAVPEAQEVLPTLQTEVWS
WGHGEHGQLGHGDNLARLQPLCIKSLNNKEVVRVAAGANHSLALTAQSQVFSWGSNSSGQ
LGHMESPSTVPRLAKLSEGIRVWDVSAGERHTLLLADGDCIQPIIYYSGQQVKEGAEENI
TKETAQREEEEEGEERAGGYTQQPVLLPFCMNLGYVSSVYAGGRRCIALSDKNVMGFINS
LHELGSAERKFYCKLCNIKTQIVRPLLELESLSSVLGPVLLGLLQTLAGRFSLLCHLTGQ
HAASLTSNLRRGRDVKSLLILDHADIFLDSYNEYCTILGNFQVMGGFQVLTKPSLDFFGK
SPELLQRLAECSEENPSMADLLVALFSLPTRHLHEYGRLLLKLATCFEVSSDDYQRLQDN
CSKFEAMVLQLKRKRKEAEYTFHFWKSFPGKMTDSLRKPHRRLICESSNKALTLQNAGRF
SVNWFILFNDALVHAQFSTHHVFPLATLWVEPIPEENTGIYGLKVITPEETFTLLACSPM
EKAKWLRSINQAVDQALNGAGQDTASVSSGSSQKLEPPISRTASYTFYKDGRLKEAIYDG
RWLAGKPNGRGVLKWPDGRIYTGTFKNGLEDGFGEFVAPNKTLNKNDQYQGHWKDGKMHG
LGTYRYASGEVYDGSFQDGMRHGHGMLRSGKLNTSSPSVFIGQWIHDKKTGYGVFDDITK
GEKYMGMWQDHLRLGTGVVVTQFGLYYEGVFKDNKMMGTGILLSEDDTTYEGEFSDDWTL
SGKGVLTMANSDYLEGSFSGEWGSGLKVTGSYFKPHLFDTDKEKTRAVKLGRLCVCAEDK
WHAVFEECWSQLGCEASGQGDTLKAWENIAVALTASRRHIELSPEMLSRSHSKTLESLEV
IPQHVGPINMERYNTIRLYLIKACDTPLHPLGRLVETLVAVYRMTYVGVGANRRLLPQAV
NEIKSYLFRIFQIVRFLFPDLPEEGGVIPEPTTNIQDKTDPDSSEASLDSPKPSRVVSSS
GLLLPVLLPRLYPPLFTLYALDKEKEDDVYWECVLRLNKQPDMALLAFLGVQQKFWPVSF
SVSMPVLGERQQVLSSTKDACFATAVETLQQISTTFTPSDKLQVIKITFEEITQEVQSLL
KQDFLWSMDDLFPVFLYVVLRARIRNLGSEVSLIEDLMDPCVQHGEHGIMFTTLKACYYQ
IQHEKVH
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccagaggaagagctctgtggatgacggcggcggagagcgaggcctgctccac
acctggaggggctactcgtacagcgtcacccccgacaggctgctcctccctcggcccgtc
ctgcaggtcgctctgggcacgcggcacggagtcctgctggtggaaggaggacaggtgtac
agttttggggagttgccatggaaacagagtcaagtccccgaggtggcgaaacccaccttg
gagagcgctctgagcggccagcgtgtggtcgccgtggcagccgggagcttccacagcggg
gcgataacggaggatggtggagtccacatgtggggggacaacggcgcggggcagtgcggc
ctgtcgggtctcacctccgtcccaaacccgactcccgtggccctgctggactctgactcc
agccctccgcagacggtgccggtgctggagctcgcctgcggggaacagcacactctggct
ctgtcggtgcagcgggaggtttgggcgtgggggagtggctgccagctgggactcaacgtc
tccgtctttcctgtgtggaagccgcagaaggtggagcacttagctggcaggtatgtgctc
caggtggcgtgcggggcctcgcacagcctggctctggtgcgctgcctgggacccctggat
gtccaccggccccccgtggacaaatgcggacagtgtaaccagctgctgtacaccatgaca
gacaaagaggaccatgtcatcatctctgacagccactactgccctctcggcgtggagctg
acggaggacgagagcaggctggaggctccgactcagacacaggggctcaaaacgtctccg
tcagagccagtcctcccctcacacacctccacctcaggacctgctaataacagcgacgcc
tcccacacgcaggactcagagaaaggagaatcatccttgactaacggagtgccgcccggc
tcagactccgacccctcggctcagtccgcagagggtagcgggggcgccgtcgctggggtc
aaaaactcaccgtatccagacgagcaggctgtgaaagaatacctgaggaaactgtcggac
acgagtcaggcagagcacatggttaaagctggggggcttcactctctgctgccttcaaca
ggaagagaaaccggctcggcgctcaataaccttgtggcctcctgcgcctcggcagtcggc
gagcgggtcgcctccacctacgaggcgttgtccctcaagaagatgatgaacttctacctc
ccctcaggtgcgtccaggtcaggtgggccggccgggatcacgggggcggcagtcaacgac
aacaccaccgagcgagtccgtcaggaggactccgtgcagaccaagaagagctcgagcacg
ggcgacatccgtgaggaggaggcggaaggtctgcggcggcgtctctcgctcccgggactc
ctctcacagggtagatacgctgttcacctcttatcctcctcctataacctgctgctgtct
ccgcggctgctgaggaaagcccatcgtcccaagatgcgtgctgtggctctcacccctttg
ggaggggcggtccctgaggcccaggaggtgctgcccaccctgcagacggaggtgtggagc
tggggccacggagagcacgggcagctgggccacggagacaacctggccagattacagccg
ctgtgcatcaaaagtctcaacaataaggaggtggtacgagtggcggccggcgctaatcac
tccctcgctctgacggctcagtcgcaggtgttctcatgggggagtaacagctccggtcag
ctgggtcacatggagtcgcctagcacggttccccgcctggccaagctgtcggagggtatc
cgggtctgggacgtgagcgcaggagagagacacaccctcctgctggctgacggagactgc
atccagcccatcatttattacagcggacagcaggtgaaggagggagcggaggagaacatc
accaaggagacagctcagcgggaggaagaggaggaaggggaggagcgagcagggggttac
acccaacagcctgtactgctccccttctgcatgaacctgggttatgtgagcagtgtgtac
gcaggcggccggcggtgcattgcgctctccgacaagaacgtgatgggtttcatcaacagc
cttcacgagctgggatcagccgagaggaagttctactgcaagctgtgtaacatcaagacg
cagatagtgcgccccctgctggagctggaatctctgagctcagtcctcggcccggtgctc
ctcggcctcctgcagacgctggcgggtcggttcagcctcttgtgtcacctgaccgggcag
cacgccgccagcctcacatccaacctgcgccgcggccgcgatgtcaagagcctgctcatc
ctcgaccatgcagacatcttcctcgactcctataacgaatactgcaccattctggggaac
ttccaggtgatgggaggtttccaggtcctgaccaaaccctcactagatttctttgggaag
agtcccgagctgctgcagaggttggcagagtgcagcgaggagaatccctccatggccgac
ctcctggtggcgctcttcagcctcccgacgcgacacctgcacgaatatggccggctgctc
ctcaaactggccacctgcttcgaagtgagctctgatgactaccagcggctacaggacaac
tgctccaagtttgaagctatggtccttcagctgaagagaaaaagaaaggaagcagagtac
accttccacttctggaagagtttcccaggaaagatgacggactctctgcggaagcctcac
cgccggctcatctgtgagagcagcaacaaagctctgaccctgcagaacgccggcaggttc
tccgtcaactggttcatcctcttcaacgacgctttggtccacgcacagttctccacccat
catgtctttccattggcgacgctgtgggtggagccgatcccagaggagaacactggcata
tatgggttaaaggtgatcacaccagaggagacgttcaccctgctcgcctgctctccgatg
gagaaggctaagtggcttcgctccatcaaccaggcggtggaccaggcgctgaacggagcg
gggcaggacacagcgtccgtcagctcggggtcgagccagaagttagagcctcccatctcc
aggactgcctcgtacaccttctacaaggacgggcgactgaaagaggcgatatacgacggc
cgctggctggccgggaagcccaacgggaggggagtgttaaagtggcctgatgggagaata
tacaccgggacgtttaagaatggactagaagacggttttggtgaatttgtggctcccaat
aagacacttaacaagaacgatcagtatcagggtcactggaaggatggaaagatgcacggc
ttggggacgtacagatatgccagcggtgaggtttacgacggatccttccaggacggcatg
cggcacggacacggcatgctacgcagcggcaagctcaacacctcttcccccagcgtcttc
atcggccagtggatccacgacaagaagacgggctacggagtctttgacgatatcaccaaa
ggagagaagtacatggggatgtggcaggatcatctgcggctgggcaccggggtcgtcgtc
actcagtttggcctttactacgagggagtcttcaaagataataaaatgatgggcaccggg
attctcctgtcagaggatgacaccacatacgagggggagttctctgatgattggaccctc
agtggaaagggtgtgctgaccatggcgaatagcgactacctggagggctccttcagcggg
gaatggggctccggcctcaaagtgacgggctcctacttcaaacctcatctgttcgacact
gacaaggagaaaacccgagctgtgaagttggggcgtctgtgtgtgtgtgcggaggataag
tggcatgccgtgtttgaggagtgttggagtcagctgggctgcgaggcatcgggccaagga
gacactttgaaggcgtgggagaacatcgccgtggctctcaccgccagccgacgacacatc
gagctcagtccggagatgttgtctcggagtcacagcaagactttggagagtttggaggtg
atcccgcagcacgtaggacccatcaacatggagagatacaacaccattcgcctttatctc
atcaaggcgtgcgacactccgctgcaccctctgggccggctcgttgaaaccctggtggcg
gtctacaggatgacctacgtgggcgtcggagccaaccgtcgcctcctgcctcaggctgtc
aacgagatcaagtcgtacctcttccgcatcttccagatcgtcaggtttctgttcccagac
ctgccagaagagggcggtgtaatcccagagccgaccaccaacatccaggataaaaccgat
ccagactcctctgaagcctcgctggattcaccaaagccaagccgtgtggtgagcagctcg
ggtctgctgcttcccgtcctgctccctcgtctctacccgcctctctttaccctctacgct
ctggacaaggagaaagaggacgacgtttactgggagtgcgtcctccgcctcaacaagcag
cctgacatggctctgctcgccttcctcggcgtccagcagaagttctggcctgtttccttc
tccgtctccatgcctgtgctgggagagaggcagcaggttctctccagcactaaagacgcc
tgctttgccaccgcagtagagacactacagcagatcagcacaactttcaccccgtctgat
aagctgcaggtcatcaagatcaccttcgaggaaatcacacaggaagtgcagtcgctgctg
aagcaggacttcctgtggtccatggacgacctcttccccgtcttcctctacgtggtgctg
cgtgctcgaatcaggaacctcgggtctgaagtcagtctgatcgaggacctgatggacccc
tgcgtccaacatggagagcatgggatcatgttcaccacgctaaaggcctgttactaccag
atccagcatgagaaggtccactaa
DBGET
integrated database retrieval system