Scomber japonicus (chub mackerel): 128354124
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Entry
128354124 CDS
T09718
Symbol
gart
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00230
Purine metabolism
sjo00670
One carbon pool by folate
sjo01100
Metabolic pathways
Module
sjo_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
128354124 (gart)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128354124 (gart)
Enzymes [BR:
sjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
128354124 (gart)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
128354124 (gart)
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
128354124 (gart)
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_3
RimK
CPSase_L_D2
ATP-grasp_2
ATP-grasp_4
Dala_Dala_lig_C
Motif
Other DBs
NCBI-GeneID:
128354124
NCBI-ProteinID:
XP_053170355
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All DBs
Position
24:complement(7269341..7279351)
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AA seq
1010 aa
AA seq
DB search
MAERVLVVGSGGREHALAWKLAQSTQVQQVLVAPGNAGTADCGKISNSEVSVSNHTILAQ
FCKDHHVGLVVVGPEVPLAAGIIDDLTAAGVPCFGPSAKAAQLEASKSFSKAFMERHGIP
TARYGSFTDPQEACDYIRKAEFPALVVKASGLAAGKGVIVAKDQDEACQAVMDIMKDRAF
GAAGETVVVEELLEGEEVSCLCFSDGSSVCPMPPAQDHKRLQDGDLGPNTGGMGAYCPTP
QVSQELLQQIRETVLQKTVDGMKEEGVPYVGVLYAGLMLTKQGPKVLEFNCRFGDPECQV
LLPLLKSDLYEVILNTMNGKLASNAPMWHQDSSAVTVVMASAGYPGSYKKGVEITGLSQV
QDTGVQVFHAGTALKDGGVVSSGGRVLTVTAVRSSLETALQAANQGVAAVGFPGAVYRRD
IGHRAISHLNQHRGLTYKDSGVDIAAGNKLVDMIKPLAKATSRAGCNAELGGFAGLFDLK
AAGFVDPILVSGTDGVGTKLKIAQACGQHGNLGQDLVAMCVNDVLAQGAEPLFFLDYFSC
GSLDVDVAASVVGGIAKACEMAGCALLGGETAEMPGVYAPGEYDLAGFCVGAVERGAMLP
RLGDIAEGDLLIGVASSGVHSNGFSLVRKVLERANLSYSSPAPFGKAGQTVGEVLLTPTK
IYSRLLLPILRSGAVKAYAHITGGGLLENIPRVLPQELAVDLDASRWTFPPVFSWLQKEG
GLSEEEMARTFNCGLGAVLVVAPVDAQRVLRQLQAQEEAWIVGSLAQKQPGAEPVVVRNL
KHSLLNAGPASSGVLGVNQNGDSNTPHKRTRVAVLISGTGTNLQALIEQAKRPSSSAEIV
VVISNRPGVQGLKRASLASIQTRVVDHKLYGSRAEFDGTIDRVLEEFGVEMVCLAGFMRI
LTGTFVKKWNGKLLNIHPSLLPSFKGVNAQTQALQAGVRVSGCTVHFVAEEVDAGAIIVQ
EAVPVLSSDTEESLCDRIREAEHRAFPAALELVASGAVRLGEDGRIIWSN
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgggtgctggtggttggcagcggcgggcgggagcacgccttggcctggaag
ctggctcagtcgacgcaggttcagcaagtcctggtggcccccggtaacgcaggcacggca
gactgcgggaagatcagcaactctgaggtgtcggtgagtaaccacactatcctggctcag
ttctgtaaggatcatcatgtggggctggttgtggtcggacctgaggtgccgctggcagca
ggtatcatagatgacctcacagctgcgggagtgccgtgcttcggcccttctgccaaagcg
gcccagctggaggccagtaagagcttttccaaggccttcatggagcgtcacggcatcccc
acggcacgttatggctccttcaccgacccccaggaggcctgcgactacattcgcaaagcc
gagtttccagcactggtggtgaaggccagcggtctggcagcagggaaaggcgttattgtg
gcaaaggaccaagatgaggcctgtcaggctgtgatggacattatgaaggacagagcattt
ggagctgcaggggagacggtggtggttgaggagcttctggagggagaggaagtatcttgt
ttgtgtttcagtgacggctcctcggtgtgtccgatgcctccagcacaggatcacaaacgc
ctgcaggatggtgaccttggcccaaacaccggtggcatgggggcctactgccccacccct
caggtgagccaggagctgctacagcagatcagagagacggtccttcagaagactgtagac
gggatgaaagaggagggcgttccctatgtgggtgtgctgtacgcaggcctgatgttgacc
aagcaggggccaaaagtccttgagttcaactgtcgcttcggagaccctgagtgtcaggtc
ctgctgcccctgctgaagagcgacctgtatgaagtcatcctgaacaccatgaatggcaaa
ctggcctccaacgcccccatgtggcaccaggacagctctgcagtcactgtggtcatggcc
agtgccggctaccccggctcctataagaaaggagtagagatcacaggcttgtctcaggtt
caagacacaggggtgcaagttttccacgccggcacagccctgaaggacggaggcgtcgtg
tccagcggtgggcgggtcctgacggtcaccgcagtcaggtcctcactggagacagctttg
caggcagctaatcagggcgtggcggccgtgggcttcccaggtgccgtgtaccgccgtgac
atcggccaccgggccatctcccacctgaaccaacacagaggtcttacctataaggacagc
ggagtcgacatcgctgctggtaacaagctggtggacatgatcaagcctctggccaaggca
acttcccgtgctggctgtaatgcagaactgggaggctttgctggactgtttgacctgaag
gcagcaggctttgtcgacccgatcctggtctctgggacagatggagtggggaccaaactc
aagatcgctcaggcgtgtgggcaacatggcaacctgggtcaggacctggtggccatgtgc
gtgaatgatgtgctggctcagggagcagagccgctcttcttcctcgactacttctcctgc
ggcagcctggatgtggacgtggccgcctcggtggtcggcgggatcgccaaagcgtgcgag
atggccggctgcgctctgctgggtggagagacagcagaaatgccaggcgtctatgctcca
ggagagtacgacctggccgggttctgtgtcggagcggtggagcgtggagcgatgctgccc
aggctgggggacatcgctgagggagacctgctgatcggagtggcctcctctggggttcac
agcaacggcttcagcctggtccgcaaagtcctggagagagctaacctcagctacagctcc
ccggctccctttggcaaagcgggacagaccgtcggggaagttttgctgacaccaacaaag
atctacagccgcctgctcttgccaatcctgcgcagtggcgccgtcaaagcctacgctcac
atcacagggggcggccttctggagaacatccctcgggtgctaccacaagagctggcagtc
gatttagatgcctctcgttggaccttccccccggtgttttcctggctccaaaaggagggg
gggctgagtgaggaggagatggcccgcactttcaactgtggcctgggggcggtgctggtg
gtcgcgcctgtggatgctcagagggtcctgcgccagctacaagcccaagaagaggcctgg
attgtgggttcactggcccagaagcagcctggtgcagagcctgtggtggtccgcaacctg
aaacacagcctgctgaatgcaggtcctgcctccagtggggtgttgggggtcaatcagaat
ggtgacagcaacacaccacacaagagaaccagagttgctgttctcatctctggcacaggc
accaacctgcaggccctcattgagcaggccaaacgtccatccagctctgcagagattgtg
gtggttatctctaacagacctggagttcagggcctgaagagagcatcgctggctagcatc
cagacacgggttgtggaccacaaactgtacgggagtcgagcagagttcgatggcacgatc
gaccgtgtgctagaagagtttggggtggagatggtgtgtctggctggattcatgaggatc
ctcactgggacttttgttaagaaatggaacggtaaactactgaatatccatccatccctg
ctgccctcattcaaaggtgtgaatgcccagacacaggctctgcaagctggggtgcgggtt
agcggctgcacagtgcactttgtcgcagaagaggtggatgcaggagccatcatcgtgcag
gaggcagtacccgtgctcagcagcgacacagaggaaagtctgtgcgacagaatccgagaa
gctgagcaccgtgccttccctgccgcgctggagctggtagccagcggcgcagtgaggctc
ggagaggatggacgcatcatctggtcaaattag
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