KEGG   Scomber japonicus (chub mackerel): 128354179
Entry
128354179         CDS       T09718                                 
Symbol
pspc1
Name
(RefSeq) paraspeckle component 1
  KO
K24993  paraspeckle component 1
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sjo03041]
    128354179 (pspc1)
Spliceosome [BR:sjo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    128354179 (pspc1)
SSDB
Motif
Pfam: RRM_1 NOPS RRM_7 RRM_5 RRM_8
Other DBs
NCBI-GeneID: 128354179
NCBI-ProteinID: XP_053170418
LinkDB
Position
24:13362332..13374686
AA seq 530 aa
MNSPGMANRNMQQASMQSSNSPQTPKQGTESPPAEQTATNKDSPAPPPQPSTPAEGADGA
GEGSGEGPAEMTLDITSFRKPGEKTFTQRSRLFVGNLPVDIPEEEFKNMFAKYGNINEVF
INRDRGFGFIRLETRVLAEIAKAELDGTILNNRPMRVRFATHGAALTVRNLLPVVTNELL
EQAFSQFGPVERAIVVTDDRGRPTGKGIVEFANKIAARKALERCTEGALLLTSTPCPAIV
EPSEHFEHEDGLPEKIMPKLPKYLKEREQPPHFAQPGTFEFEYSSRWKALDDMEKQQREQ
VDRNIREAKEKLEAELESAKHEHQLMLMRQDLMRRQEELRRLEELRNQELQRRKQIEMRH
EEERRRREEEMMRYREQEDLRRQPEGFKPNVMDNREQEMRVGELGPRGAINMGDGYNQAS
AGPGANQGQMMGMSGRGGAIGPEGTANMGSPLMSDNGAMRSNRYPQGGAMGGRPEVESPK
QQQQQQQQQQQQQQQQPPLGPQVGPAPGFGRGSPGVGEVFDGPNNKRRRY
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgaatagtcccggcatggctaaccgaaatatgcagcaagcgagcatgcaaagcagcaat
tctccgcaaacaccgaaacaaggtaccgagtctcctcccgcggagcagacagcgacaaac
aaagacagccctgccccgccgccgcagccttctaccccagccgaaggagccgatggagcc
ggagagggaagcggagaaggtcctgcagaaatgacgctggatatcacaagctttcggaag
cccggtgagaagacgttcacccagcgctcccgcctttttgtcggcaacctcccagtggac
atacccgaggaagagtttaaaaacatgttcgctaaatacggaaacattaacgaggtgttc
atcaaccgggaccgcggtttcggcttcattcgtctggaaacacgggtgctggcagaaatt
gctaaagctgagctcgatgggaccatcctgaataaccgaccaatgagggtccgctttgca
acacatggcgctgcactcacagtgcgcaacctgttgcctgttgtaacaaatgagctgctg
gaacaggcgttttcacagttcgggccggtggaacgggctattgtggtgacagatgaccgt
ggtcgtcccaccgggaaaggcatcgtagagtttgcaaacaaaatagctgcaaggaaagcc
ctggagcgctgcactgagggagcgctgctgctaactagcacaccttgccctgccattgtg
gagccctcagagcactttgaacacgaggatgggttgcctgaaaaaattatgccgaagctt
ccaaagtacctaaaggaaagggagcagccgccacatttcgctcagccggggacgtttgag
tttgaatactcatctcgctggaaagctctggatgacatggagaaacagcagagagagcag
gtggacaggaacattcgagaggccaaagagaaactggaggctgagctggaatcagccaaa
catgaacatcagctaatgctaatgagacaagatctaatgaggcgtcaggaggagttgagg
agactggaggagcttcggaaccaggagctgcagaggcgaaagcagatagagatgaggcat
gaggaggagagaagaagaagagaggaggaaatgatgcgatacagagaacaggaggacctg
agacgccaaccagaaggctttaaaccaaacgtaatggacaatagagaacaggaaatgaga
gtgggtgagctgggccctcgtggagccattaatatgggagacggctataaccaggcctct
gcggggcccggtgctaaccagggtcaaatgatgggcatgagtggaaggggaggagccatt
ggcccagagggaactgcaaacatgggctcaccattgatgtctgacaatggagccatgcga
agcaatagatacccacagggtggagcaatggggggcagaccagaggtagagtccccaaag
cagcagcagcaacagcagcaacagcagcaacagcagcagcagcagcagccaccgttaggc
ccccaggttggaccagcccctggatttggaagggggagtccaggggtaggggaagtcttt
gatgggccaaataacaaacgtcgcagatactaa

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