Scomber japonicus (chub mackerel): 128354194
Help
Entry
128354194 CDS
T09718
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128354194 (gtf3c3)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
128354194 (gtf3c3)
TFIIIC, fungi type
128354194 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_14
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_6
TPR_12
TPR_11
TPR_7
TPR_9
ANAPC3
TPR_20
TPR_Slam
PknG_TPR
TPR_10
HAT_PRP39_C
Sel1
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
128354194
NCBI-ProteinID:
XP_053170436
LinkDB
All DBs
Position
24:15498042..15511775
Genome browser
AA seq
943 aa
AA seq
DB search
MSGFSAELIDYLEGRITFEEFDKRRDERKAKESCQESDVLVEDEEEDAQPSTSAQAQGIT
EEGVSPGVQLAFASMLGETPDPLSSEEEEEEEEDSLSYADDENDEDYKVEEEEEEKKKKQ
RGKAKLDLSEKTQKGGEGEEQEAEDMTVGDVFALEMELNRENKKMMKERRNRSKLPRALR
GLMGEANIRYARGEKEDAIMMCMEIIRQAPLAYEPFSTLAMIYEDDEDMDKALQFGLIAA
HLNPSDCEEWIRLAEMSLEQDNIRQAIVCYTKAIKYDPTNVRYLWERSSLHMRVGEHKQC
MDGYRRILSLLPLEDGEHFMQLSKDMAKSYYESNDLPSALGVIEDALSRHPSLVSDDVIN
MAAELYIANRQYNKALQVLVKFAGVVLVRGETKPDCTVLPKEEKVSEKTTEEEEEKNEEG
AKSKTVEETAAEENGEIKDVQVPDSVPVDLKAKLIVCLIHLHVNTPLEGLVSTMTEQSPE
EIGDLYLDVGEAYLEQGEYLCALPLLSALVISEKYNLAVVWLRHAECLKALGHMEEAAQS
FTKVVEMAPQHLEARLSLATLQQQLGRPDCALKALESMYDSDTLAQDSSAAQKELKLLLH
RSTLLKTQGQIQHYLDAMITMISMLLKVAMQRAKVCVCSVTVSGEQHLRLVKTKDMLPEI
ADQEAAYLDNTGKTNVLSREDWWQLLVSCLLTLCEVERYKEAELLVESAMEFYSFYDNKP
RRKELEFFGLSATILDHNHYKAYNYIRLMLMENVDRPQLWNIFNQLTITSQHQRHHRFCL
RLLLKHPDNHALCVLCGHNAMVSGSFKHALGQYVQAFKTHPNNPLQSLCVGLTFFHMASQ
KYVAKRHTLVLQGFSFLWRYLELRGECQESMYNLGRALHQMGLTHLAIHYYQKALTLPAQ
KLEGITDDQVDLRREIAFNLSLIYQASGNLEMAHQLINTHCVI
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggttcagcgctgagctcattgactatctggagggaagaataacttttgaggag
tttgataagaggagagacgagaggaaagcgaaggagtcctgtcaggagtcagatgtgtta
gttgaagatgaggaagaggatgctcagccctccacctctgcacaggcacaagggataaca
gaggagggagtcagcccaggggtccagctggcctttgcctccatgctgggagaaacccca
gaccccctgtcttcagaggaagaggaggaggaagaggaggacagcttgagctatgcagac
gatgaaaatgatgaggattacaaggtggaggaggaagaggaggagaagaagaagaagcag
cgtggaaaggcaaagttggatctgtcagagaagacacagaagggaggagagggagaagag
caggaggctgaggacatgacggtgggagatgtgttcgcactggagatggagctgaaccga
gagaacaagaagatgatgaaggagcggcgtaaccgcagcaagctgccccgcgctctgaga
ggtctgatgggagaggccaacatccgttacgccagaggagagaaagaagacgccatcatg
atgtgtatggagatcatcagacaggctcctctggcctatgagcctttctccacactggct
atgatctatgaggatgatgaagacatggacaaagcgctgcagttcggtctgatcgctgcc
cacctgaacccctcagactgtgaggagtggatcagactagcagaaatgtctctcgagcaa
gacaacatccggcaggccatcgtctgctacaccaaggccatcaagtacgaccccaccaac
gtgcggtacctgtgggagcgctccagcctccacatgcgcgtgggcgagcacaaacagtgc
atggacggctaccgcaggatcctctcactgctgccgctggaggacggagagcacttcatg
cagctgtccaaggacatggccaagagttactatgagagtaatgacttgccctctgcactg
ggtgtgatagaggatgctctgtcgcgacaccccagcctggtcagtgatgatgtcatcaac
atggcagctgagctctatatcgccaaccgccagtacaacaaggccttacaggtcttggtt
aagtttgcaggtgtagttttggtcaggggggaaaccaaaccagactgcacagttctgcca
aaagaagagaaagtgtcagagaagacgacggaggaggaggaggagaagaatgaagaagga
gcgaagtcaaagactgtagaggaaacagcagcagaagaaaacggtgaaattaaggatgta
caggtaccagacagcgtcccagtggacctgaaggccaagctcattgtctgcctcatacac
ctgcatgtcaacactcccctggagggcctggtgtcaacaatgacagagcagagtccagag
gagattggggacttgtatctggatgtaggtgaagcctacctggagcagggagagtacctg
tgtgctctgcctctgctgtctgcactcgtcatatcagagaagtacaacctggctgtggtc
tggctccgacatgcagagtgtctgaaggcgctgggccacatggaggaggcagcacaaagc
ttcactaaggtggtggagatggctccgcagcacctggaggcccggctgtccctggccacc
ctgcagcagcaactgggccgaccagattgcgccctgaaggccctggagtccatgtacgac
agtgacacactcgcacaagactcatcagctgcacaaaaggagttaaagctgctgctgcat
cgctccacactgctgaagactcagggacaaatccagcactacctggatgctatgatcact
atgatctccatgctgctcaaggtggccatgcagcgtgctaaggtgtgtgtgtgctctgta
accgtgtcgggtgagcaacacctgaggctggttaagaccaaagacatgctgcctgagatc
gctgaccaggaagctgcctatctggataacacaggtaagacaaacgtcctgtccagagag
gactggtggcagctgctggtgagctgcctgctcacactgtgtgaggtggagcgctacaaa
gaggctgagctgctggtggagtcagccatggagttctactccttctatgacaacaagccc
aggaggaaggagctggagttcttcggcctgtctgcaaccatcctggaccacaaccactac
aaggcctacaactacatcagattgatgctgatggagaatgtggatcgacctcagctttgg
aatattttcaaccagctgacaataacatcccagcaccagcgtcaccaccgcttctgtctg
cgtctgctgttaaaacaccccgacaaccacgccctgtgtgtcctctgtggacacaatgcc
atggtgtcaggaagcttcaaacacgctctgggtcagtatgttcaggccttcaagactcac
cctaacaacccactccaaagcctgtgtgtgggtctcaccttcttccacatggcatctcag
aagtatgtagccaaacgtcatacactggtgcttcagggtttctccttcctgtggcgctat
ctggagctgcgtggagaatgtcaggagagtatgtacaacctgggcagagcactacaccag
atgggcctcacacatttggccatacattattaccagaaggctcttacactgcctgcacag
aaacttgagggtatcactgacgatcaggtggatctgaggagggagatcgccttcaacctc
tccctcatctaccaggccagcgggaacctggagatggcccaccagctcatcaacacacac
tgcgtcatctga
DBGET
integrated database retrieval system
