KEGG   Scomber japonicus (chub mackerel): 128354197
Entry
128354197         CDS       T09718                                 
Symbol
zranb3
Name
(RefSeq) DNA annealing helicase and endonuclease ZRANB3 isoform X1
  KO
K25861  DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sjo03032]
    128354197 (zranb3)
   03400 DNA repair and recombination proteins [BR:sjo03400]
    128354197 (zranb3)
DNA replication proteins [BR:sjo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    128354197 (zranb3)
DNA repair and recombination proteins [BR:sjo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    128354197 (zranb3)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HNH Zn_ribbon_RanBP DEAD HNH_5 Flavi_DEAD ERCC3_RAD25_C nSTAND3 DUF2116
Other DBs
NCBI-GeneID: 128354197
NCBI-ProteinID: XP_053170438
LinkDB
Position
24:complement(13113408..13194077)
AA seq 1152 aa
MDDNGLQTSHCDTRWSQQLSGLPPKLLQRLMPFQREGVEFALSKNGRCMIADEMGLGKTV
QAIAVAYAFRQEWPLLVVVPSSLKYPWIEELERWIPELQPGDINLVENKSDTMGISRSKV
TVLGYGLLTTDARLLVEALSRQNFSVVVVDESHYLKTRNAARTKILVPFIQSAKRAILLT
GTPALGRPEELFMQIDALYPKRFGTWTDYAKKYCNAHYKYFGRRRQWDCRGASNLEDLHQ
RLSQTMIRRLKAEVLTQLPPKVRQRIPFDLPKEAAKEASASFAKWERLMKGMGSQVATMD
NPFTEVMSLVTQMYKQTAIAKAGAVKDYIKMMLEAEQLKFLVFAHHLTMLQACTEAVIEA
KAGYIRIDGSVPSSERMQLVHKFQSDPETRVAVLSIQAAGQGLTFTAATHVVFAELYWNP
GHVKQAEDRAHRIGQTSSVNVHYLIAKGTFDTVMWSMLNRKEKVTGSTLNGRKEYLKAEE
GDKDRWDFLNFANAWTPSEMVLPLEKNSGSGKDDLFFTHFEKEKQHDIRSFFSPGASQEE
KKKRKRMEDEETSPSFSLETSAASVGRGANSEKREEKKDKSSTPDQDFSPQMKKLRTPQA
SPSPGPSPRSRIGGKRRSTARKSALLSSMAPWKLSEPKNPPAEMWSCGACTYSNSSLLPY
CEVCEFPRSSSGITSEPLRPQQPLSTERDQACIVLSDSDSEPGISWGRAQPPKSSKDKQS
EEEEEREEEEDEPPKDKQKLEEAEDEDKRRLKGKQSAGEQGDVVAGSGGCLLPDHTQDRR
AAVCLSSAADANDDDEGDDGDDASTAHPVYPGLQFCASQYTDRIYLFSKDGTALNLSFIP
LDIKLTNWDDLPEAFSWRQENRIQVQRFVQEWSSLAAMKQKLLRRSGLLFHSPTLGLQQL
ATAQRPHSSTKRYLSRDEVAQASTSKAQQEGGSVRLVTKETFFAKRRSASSLTPPASERE
DKPSCETVEERPSSESGYLQAVDSQGVPLCLSCQQACSTSGGAWDTRFCSHRCQEEFQLR
SSQTYMRSRVLEAEQGICQQCGLHAHDLFLKVRNAPPSQRKEMLENTWLSQLSLKELNEM
IRAPVEGGFWQVDHIRPVYSGGGQCSLDNLQTLCTVCHKARTAKQAKERSQMKKSTAASK
VASDISRFFVKK
NT seq 3459 nt   +upstreamnt  +downstreamnt
atggatgataatggcctacagacctctcactgtgatacaagatggtcacagcaactgtca
ggccttcctcccaagctcctgcagcgcctgatgcctttccaaagggagggagtggagttt
gctttgtcgaagaacggacggtgtatgatcgctgatgagatgggtcttgggaagactgtg
caggccatcgccgtggcgtacgccttcaggcaagagtggcccctcctggtggtggtgccc
tcgtccctcaaatatccctggatcgaggagctggagaggtggatccccgagctgcagcct
ggagacatcaacctggtggagaacaagagcgacaccatgggcatcagcaggagtaaggtt
acggtgctgggctacggcctgctcaccacagatgcacgcctcctggtggaagctctgagc
aggcagaacttctccgtggtggtggtggacgagtcgcactacctgaaaaccaggaacgca
gcgcggactaagattctggtgcctttcattcagagcgccaagcgggccatccttctcacc
ggcaccccggccctgggtcgccctgaagagcttttcatgcagattgatgccctttacccc
aagagatttggaacctggactgactacgccaagaaatactgcaacgcccattacaagtat
tttgggcgtcgcaggcagtgggactgtcgcggggcatccaacctggaggatctgcaccag
cggctcagccagaccatgatccgtcgtcttaaggccgaggttctcactcagctgcccccc
aaagtgcgccagcgtatcccattcgacctgcccaaggaggccgctaaggaggcctcggcc
agcttcgccaagtgggagagactgatgaagggaatggggtcgcaggtcgccaccatggac
aaccccttcactgaggtcatgagcctggtcacacaaatgtacaagcaaacagctattgcc
aaggcgggagctgtgaaggactacattaagatgatgctggaggcagagcagctgaagttc
ctcgtgttcgcccaccatctcaccatgctgcaggcctgcaccgaggccgtcatcgaggcc
aaggctggttatatccgtatagatggcagtgtcccgtcctcagagagaatgcagttagtc
cacaagttccagagcgacccggaaacccgagtggccgtcctgagcatccaggcagccggt
cagggtttgaccttcaccgccgccacccacgtggtgttcgccgagctctactggaacccc
ggccacgtcaagcaggcggaggatcgcgcccaccgcatcgggcagacgtcctcggtcaac
gtgcactacctcatcgccaagggcacctttgacaccgtcatgtggtccatgctcaacagg
aaggagaaggtgactggtagcactctgaatgggaggaaggaatacctgaaggctgaagag
ggtgataaggacaggtgggacttcctcaactttgccaacgcgtggaccccgagcgagatg
gtgctgccgctggagaagaactcagggagcgggaaagacgacttgttctttactcatttc
gagaaggagaagcagcacgacatccgttccttcttctccccgggcgccagccaggaggag
aagaagaagaggaagcggatggaagatgaagaaacgtctccctccttctccttggagacg
agtgccgcctcggttggcagaggagcaaactctgagaagagagaggagaagaaagacaag
tcctcaacgccagaccaagacttctccccgcagatgaagaagctgcggacgccacaggcc
agcccgagccccggcccgagccctaggtctcgaatcggggggaagcggaggtcgacagcg
aggaagagcgcccttctctcctctatggcaccatggaagctatcggagcccaaaaaccct
cctgctgagatgtggagctgcggggcctgcacctactctaacagcagcctgttgccttac
tgtgaggtgtgtgagttcccacgctcctcctctggtatcacatcagagcctctcaggcct
cagcaacccctctcaaccgagagggaccaagcatgcatcgtcctctctgactcagacagc
gagccagggatcagctggggaagagcccagcctccgaaatcgagcaaagacaaacagagc
gaagaggaggaggagagggaggaggaggaggatgagcctccgaaagacaaacagaaatta
gaagaagcagaggacgaggacaagcggcggctcaaaggcaaacaatcagcgggagagcaa
ggcgacgttgtcgctggcagtggcggctgcctcctccctgaccacacacaggaccggaga
gctgcggtgtgtctgtcttctgctgcggatgctaatgacgatgatgagggcgatgatgga
gatgatgccagcaccgcccatcctgtgtacccgggcctgcagttctgcgccagccagtac
acagaccgaatatatcttttctctaaggatggtacagcgttgaacttgagcttcatcccc
ctggacatcaaactaaccaactgggacgacctgcccgaggccttcagctggcgccaggaa
aatcgaatacaggtgcagcgcttcgtgcaggagtggagcagcctggcggccatgaaacag
aaactgctccgacgcagcggcctactcttccacagtcctactctcggcttgcagcagctg
gccaccgcccagcgccctcattccagcaccaagaggtacctcagtcgagacgaggtggcc
caggcctccaccagcaaggcccagcaggagggcggcagcgtcaggctggtcaccaaggag
accttcttcgccaagaggaggtccgcctcttctctaactccacctgcttcagagagggag
gacaagccgtcctgtgagacagtggaggagcggccgtcatcagagtctggctacctgcag
gcagtggacagtcagggtgtccctctgtgtctgtcctgccagcaggcgtgctctacctcc
ggtggggcctgggacacccgattctgcagccacaggtgccaggaggagtttcagttgcgc
tccagccagacgtacatgcgctctcgggtgctggaggctgagcagggcatttgtcagcag
tgcggcctccacgcccacgacctcttcctgaaggtccgcaacgccccgccttcccagcgc
aaggagatgctagagaacacttggctctcgcagctgtcactcaaagagctgaacgagatg
atccgtgctccggttgaagggggtttctggcaggtcgaccacatccggccggtctacagt
ggaggaggacagtgctctttggacaacctgcaaacgctctgcaccgtctgccacaaagct
aggacggctaagcaagccaaagaacggagccagatgaagaagagcaccgcagcctccaag
gttgcgtcagacatcagcagattcttcgtcaagaaatga

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