Scomber japonicus (chub mackerel): 128354366
Help
Entry
128354366 CDS
T09718
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 1-like
KO
K17477
FERM, RhoGEF and pleckstrin domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128354366
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128354366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_N
FERM_M
FA
SOS1_NGEF_PH
IQ_SEC7_PH
RHG20_PH
PH_13
PH_20
Motif
Other DBs
NCBI-GeneID:
128354366
NCBI-ProteinID:
XP_053170577
LinkDB
All DBs
Position
24:complement(7809436..7859242)
Genome browser
AA seq
1039 aa
AA seq
DB search
MVEPGDKPSTAGQRLGAPESFGVSTLEPGLRPPAQQPGKQVSLRVQMLDDTQEVFQISQR
SPGKLLFDLVCAHLNLVEGDYFGLEYLDQRKMTVWLDLLKPTLKQIRRPKNTILRFVVKF
FPPDHTQLTEELTQYLFALQIKRDLACGHLICNDTSAALMVSHIIQSEIGDFDETQSWQH
LLHNKYLPDQDAIRDKITDCHRKHVGQTPAESDYQLLEIARRLEMYGVRLHPAKDREGTK
LSLSVAHTGVLVFQGYTKINAFNWSKIRKLSFKRKRFLIKLRADPAQNAPHHDTLEFAMA
SRDCCKIFWKICVEYHAFFRLFEEPKPKPKPILFTRGSSFRFSGRTQKQIIDYVKDSEIK
KVPFERKHSKILSSGSMTPQSSSFRSQVPKESATSVPLVDQPDSARLAHQVESNGSEELA
AATSPTNGFHDIQVAPRSDPTQPRQNHHGTGSAPDQQLLNPGSPGSEDSPLGSPCVVVNG
NGSVNGQGMGGTSVLGPCQSPEGRQLSPLTSPLLTDAGYVRNEDEEEARRKKFPTDKAYF
IAKELLTTERTYLKDLQVITESFQGVAGKDEAFPDSVTSLISTSYDPVYKFHQGFLKEVE
QRLAQWEGRSNAHIKGDYQRIGDVLLKNIQGLRQLTIHLQKHSECLVELERVCRSSRKAE
AVCREFEQQRVCYLPLNIFLLRPLHRLLHYKLILERLCKHYPPTHDDFRDSRAALADISE
MVLQLQGTMMKMENFQKLLELKKDLTGIDNLASPGREFIRLGCLSKLSGKGLQQRMFFLF
SDSLLYTSRGMTPSNQFKIHGQLPLYGMTIRESEEEWGVPHSFTLFGQRQSVVVAASCAS
EMERWVEDIRMAIDLAEQSSSPQSDLLSTSPTDNKLSEDGGAEQESEEELCGSRSSLERQ
GHRGNTTVHVCWHRNTSVSMVDFSVAVENQLSGNLLRKFKNSNGWQKLWVVFTNFSLFFY
KSHQDDYPLASLPLLGYSVTVPSESENIHKDYVFKLHFKSHVYYFRSESEYTFERWMEVI
RSATCSASRSLPSTRKDLY
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaccaggcgacaagccgtctacagccggccagaggctgggcgcccccgaaagt
ttcggagtgtccaccctagagccaggcctacgccctcctgcccagcagccagggaaacaa
gtctccttaagggttcagatgcttgatgacacgcaggaagtcttccagatatcgcaacgt
tcccctggaaaactgctattcgacctggtttgcgctcatctcaacctggtagagggggat
tattttgggctggagtacctggaccagcgcaagatgacggtgtggctggatctgctgaag
ccgacattgaaacagataagacggcctaaaaacaccatccttcgttttgtggtgaagttc
ttccctcctgaccacacacagctaacggaggagctgactcagtatctgtttgccctgcag
ataaaacgtgaccttgcctgcggtcatctcatctgtaacgacaccagcgctgctctcatg
gtctcccacatcattcagtccgagataggagacttcgatgagacccagagctggcagcat
ctcctccacaacaagtacctgcccgaccaggacgccattagggacaagatcactgactgc
caccgcaagcatgtcggccagaccccagcagagtcagactaccagctgctggaaattgcc
cggcggttggagatgtacggcgttcgtctccacccggccaaggaccgagagggcactaaa
ctcagcctgtctgtggcacacactggggtgttggttttccagggatacacaaaaattaac
gcattcaactggtccaaaattcgcaagctcagcttcaaacgtaaaagattccttatcaag
ctgagagcagaccctgctcaaaacgccccccaccatgacacgctggagtttgccatggcc
agtagggattgctgtaagatcttctggaagatttgtgtcgagtatcacgccttcttcagg
ctcttcgaggagcccaagcccaaacccaagcccatccttttcacccgtggctcctcgttc
cgcttcagtggtcgaacccagaagcagatcattgattatgtgaaagattcagagatcaag
aaggttccatttgaaaggaaacacagtaagattctgtccagtggcagcatgacccctcag
tcgtcttccttcagatcacaagtgccaaaagagagtgccacatctgtcccattagtagac
cagcctgactcagccagactggcccatcaagttgaatctaatggttcagaggagctggca
gcagctacatcccccaccaacggtttccacgatatacaggtggcgccccgctcggacccg
actcagccccgacagaaccaccacggcaccggatcagcaccggaccaacaactcctcaac
ccaggaagccccggttcagaggactctccactgggaagtccctgtgtggtagttaacggg
aacggctcggtaaatggacagggcatgggcggcaccagtgtcctgggtccatgtcagagt
cccgagggacgccagctatcgccgctcaccagcccgctgctcactgacgcaggatatgtc
cgcaacgaggatgaagaagaggcgaggaggaagaagtttcccacagacaaggcctatttc
atagccaaggaactgttgaccacagagcggacctacctcaaagacctgcaagtcatcaca
gagtctttccagggtgttgcagggaaagacgaggcgttcccagactccgttaccagcctg
atctccaccagctacgatccggtctacaaattccatcagggattcctcaaagaggtggag
cagaggctggcacagtgggagggtcgctccaacgctcacattaaaggggattatcagcga
atcggtgacgttctactgaagaacattcagggcctgagacagttgacaattcatctccag
aaacactcagagtgcctggtggaactggagcgagtctgtaggtccagtcggaaggcagag
gctgtgtgtcgggagtttgagcagcagagggtctgctacctcccccttaacatcttcctc
ctcaggcctctccaccgcctgctgcactacaaactcatcctcgagaggctctgcaagcac
tacccgcccacccacgatgacttcagggactccagagctgctctggccgacatttcggag
atggtgctgcagctccaaggcaccatgatgaagatggagaactttcagaagctcctggag
ctgaagaaagatctgaccggcattgacaaccttgcctcacccgggagggaatttatccgg
ctcggttgtctcagcaagctctcagggaagggccttcagcagagaatgttcttcctgttc
agtgattccttgttgtacaccagtagagggatgaccccgtccaaccagttcaagattcat
ggccagctgcctctatatggcatgacgatccgagaaagtgaggaggagtggggagtccct
cactcattcaccttgtttggacagcgccagtctgtggtggtggctgccagctgtgcatca
gagatggagcggtgggtggaggacatcaggatggcaatcgacctggcggagcagagcagc
agtcctcaaagtgaccttctctccaccagccccactgacaacaagctgtcggaggacggt
ggagccgagcaagagtctgaggaggagctctgcggttcgcgctcatctctggagcgccag
ggtcaccgtggtaacaccaccgtgcacgtctgctggcatcgcaacactagcgtatccatg
gtggactttagtgttgctgtggagaaccagttgtcaggtaacctgctgaggaagtttaag
aacagtaacggctggcagaaactctgggtggtcttcaccaacttcagcctctttttctac
aagtcgcaccaggatgactaccctctggccagccttcctctgctgggctactctgtcacc
gtcccatctgagtcggagaacatccacaaggactacgtcttcaaacttcactttaagtcc
cacgtctactacttcagatcggagagcgagtacacgtttgaaaggtggatggaggtgatc
cgcagcgccacgtgctccgccagccgctccctgccgagcactaggaaagatctttactga
DBGET
integrated database retrieval system
