Scomber japonicus (chub mackerel): 128354404
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Entry
128354404 CDS
T09718
Symbol
appa
Name
(RefSeq) amyloid beta (A4) precursor protein a isoform X1
KO
K04520
amyloid beta A4 protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128354404 (appa)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sjo00535
]
128354404 (appa)
00536 Glycosaminoglycan binding proteins [BR:
sjo00536
]
128354404 (appa)
Peptidases and inhibitors [BR:
sjo01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
128354404 (appa)
Proteoglycans [BR:
sjo00535
]
Cell surface proteoglycans
Others
128354404 (appa)
Glycosaminoglycan binding proteins [BR:
sjo00536
]
Heparan sulfate / Heparin
Others
128354404 (appa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
128354404
NCBI-ProteinID:
XP_053170615
LinkDB
All DBs
Position
24:complement(10119013..10154278)
Genome browser
AA seq
787 aa
AA seq
DB search
MGDRVALLLLAVVASALAAEVPTDVSMGLLAEPQVAMFCGKLNMHINVQSGKWEPDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQNWCKKGRKQCRSHLHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDQCESHLHWHTVAKESCGDRTMNLHDYGMLLPCGIDRF
RGVEFVCCPAEAERDADSTEQDADDSDVWWGGAETDYSDNSMVREPEPTEQQEETRPSVV
EEDVEEEEEVAEEEEEEEEEEDEEDLLDNDQDGDGEEDEEVVEEEAEEEEGDEDIVDTLD
DNDDADEPTTNVAMTTTTTTTTESVEEVVREVCWANAETGPCRALLPRWYFDREEGRCAQ
FIYGGCGGNRNNFESEEYCLSVCSSVLPTATPSSPDAVDHYLETPADENEHAHFQKAKES
LEAKHRERMSQVMREWEEAEREAKNLPRPDKKAVIQRFQEKVEALEQEAASERQQLVETH
MARVEALLNDRRRLALESYLTALQQDPPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHVRM
VDPKKAAQIRPQVLTHLRVIEERMNQSLGLLYKVPGVADDIQDQVELLQREQAEMAQQLA
NLQTDVRVSYGNDALMPDQELGDGQTDLLPQEDSLGLGGVGFIHPESFNQPNTENQVEPV
DSRPNLDRGIPTRPVNGMKMEAIPELRMETEDRQSAEYEVHHQKLVFFAEDVGSNKGAII
GLMVGGVVIATVIVITLVMLRKKQYTSIHHGVIEVDAAVTPEERHLSKMQQNGYENPTYK
FFEQMQN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccgagtagctttactgctgctagctgtagtggcgtcggctctggctgccgag
gtgcctacagatgtttcaatgggtctgttggcagagccccaggtggccatgttttgcggt
aaactcaacatgcacatcaacgtgcagagtgggaagtgggaaccggacccctcgggcacc
aagagctgcatcggcaccaaggagggcatcctgcagtactgccaggaggtgtacccagag
ctccagattaccaatgtagtggaagccaaccagccagtcagcatccagaactggtgcaag
aaggggcgcaagcagtgtcgcagtcacctgcacatcgtggtgccctaccgctgcctggtg
ggagaatttgtgagtgacgccctgctcgttcctgacaagtgcaagttcctgcatcaggag
cgcatggaccagtgtgagagccacctgcactggcacactgtagccaaggagtcttgcgga
gaccgcaccatgaacctccacgactacgggatgctgttgccgtgcggcatcgaccgtttc
cgaggggtggagtttgtgtgctgccccgccgaggcggagcgtgacgctgacagcaccgag
caggacgccgatgattccgatgtctggtggggtggagcggagactgactactctgataac
agtatggtgcgggagccagagccaacggagcagcaagaggaaaccaggccatctgtggta
gaggaggacgtggaggaggaggaggaagtggccgaggaggaagaggaggaagaggaggag
gaggatgaggaggacctgctggataacgaccaggacggagacggagaggaggacgaggag
gtggtggaggaagaggcagaggaggaggagggagacgaagacattgtcgacacgctcgac
gacaatgatgacgccgatgagcccaccaccaacgttgccatgacgaccaccaccaccacc
accaccgagtctgtggaagaggttgtcagggaggtgtgctgggccaatgctgagactggt
ccatgtagggccttgctgccccgctggtactttgaccgtgaggaaggccgctgtgctcag
tttatctacggcggctgtggaggcaacaggaataactttgagtcagaggagtactgcttg
tctgtctgcagcagcgtcttacccacagccacgcccagctcccccgacgccgtagaccac
tacctggaaacgcctgccgatgaaaacgaacacgcccacttccagaaggccaaagagagc
ttggaggccaaacaccgtgaaaggatgtcccaggtgatgagagagtgggaggaggctgag
agggaggccaagaatcttccacgccctgacaagaaggctgtcatccagcgtttccaggag
aaggttgaggcactggagcaggaggcagccagcgagaggcagcagctggttgagacccac
atggccagagtggaggctctgctcaacgaccgccgccgcctggctctggagagctacctg
accgccctgcagcaagacccacccaggccccgtcatgtgttcagcctgctcaagaagtat
gtgcgtgccgagcagaaggacaggcagcacaccctcaaacacttcgaacacgtccgtatg
gtggatcctaagaaagctgcacagatcagacctcaggtgctgacccacctgcgtgtcatt
gaggagcgtatgaaccagtctctgggacttctctacaaggttccaggtgtggctgatgac
atccaggaccaagttgagctcctgcagagggagcaggcggagatggcccagcagctggcc
aacctgcagacggacgtgagagtgagctacggcaacgatgccctgatgcccgatcaggag
ctcggagacggacagaccgaccttttgcctcaggaggactcactgggcctgggaggagtt
ggcttcatccaccccgagagcttcaaccagcccaacactgaaaaccaggttgagccagtg
gactctcgccccaaccttgacagaggcattcctacacggccagtgaatggaatgaagatg
gaagctattcctgaactccggatggagacggaggacagacagagcgctgaatatgaagtt
caccaccagaaactggtcttcttcgctgaggatgtgggctccaacaagggcgccatcatt
ggcctgatggtcggaggcgtcgtcatagcaaccgtgatcgtcatcaccctggtgatgctc
aggaagaagcagtacacctccatccaccatggagtcattgaggtggatgctgccgtcacc
cccgaggagcgccacctgtccaagatgcaacagaacggttacgagaacccaacctacaag
ttctttgagcagatgcagaactga
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