KEGG   Scomber japonicus (chub mackerel): 128354420
Entry
128354420         CDS       T09718                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit-like isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128354420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sjo03041]
    128354420
Spliceosome [BR:sjo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    128354420
 Complex B
    128354420
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 128354420
NCBI-ProteinID: XP_053170637
LinkDB
Position
24:8412832..8420536
AA seq 227 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNAQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRHRSRSRSRERRSRSRDRRRDRERRRSRDRERSGRF
NT seq 684 nt   +upstreamnt  +downstreamnt
atggcggagtatctggcatccattttcggcacagagaaagacaaggtcaattgttctttc
tattttaaaatcggtgcttgcagacatggagaccgctgctcgagattgcacaacaaacca
accttcagccagaccatcttgattcaaaacatctaccgaaatccccagaacagtgcacag
acggcagatgcttcacgctgtgccgtcagtgatgtggaaatgcaggagcactatgacgag
ttctttgaggaggtgtttacagagatggaggagaagtatggagaggtggaggagatgaac
gtgtgcgataacttgggcgaccacctcgttgggaacgtctacgtgaagtttcgtcgagag
gaggatgcagagaaagcagtcatggacctgaataaccgctggttcaacgcccaacccatc
cacgcagagctctcacccgtcactgacttcagggaagcttgctgccgccagtatgaaatg
ggagagtgcacccgaggtggcttctgcaacttcatgcacctgaaacccatatcacgggaa
ctccgtagggagttgtatggccgccgcaggaaaaggcaccgctctcgctcgcgctcccgg
gaacgacgctcccgctccagggatcgacgaagggaccgcgagaggcggaggtcgagggac
cgagaacgctctggacgattctga

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