Scomber japonicus (chub mackerel): 128354431
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Entry
128354431 CDS
T09718
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128354431
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128354431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_NPAS4
HLH
PAS_9
PAS_4
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
128354431
NCBI-ProteinID:
XP_053170647
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All DBs
Position
24:4116635..4192122
Genome browser
AA seq
1010 aa
AA seq
DB search
MLGNTALYAVKKRKKPVQKIPKPSPPDGAKSNPSKRHRDRLNGELDKLTSLLPFTEEVRA
RLDKLSVLRLSVGYLKVKNFFNATIKKGQNGTSWSSERSLMFGSNPLTPSSASSVTSPSS
SQITSIDGVSFSEGDLLLQALNGFVLVVTAEGYVFYTSPTIQDFLGFHQSDVVHQSVFEL
IHTDDRALFRRQLHFALNTQSQHDGSVESPSEQSSSEVNSNLMTYDPQVVPPENSSFLER
NFCCRFRCLLDNSSGFLALNFRGRLKFLHGQNRLSEDGTLIPPQLALFAIAMPLQPPSIL
EIRTKTLIFQTKHKMDFTPMGVDARGKVVLGYNETELCTRGTGYHFVHAADMMYCADNHV
RMMKTGDSGFTVFRLLTKTGTWLWVQAIARVIFKGGKPDFIVARQRALTNEEGEEQLRLR
RLQLPFDFATGEALLYDLAPTVDVPDPSPAAKQRKIDNYSVSRDSLLGCMLSQDQSVYCE
NNSANINDVAFKDTHATVNVPVNLWQQQSSPKPVGSLVKSEGTVQDMMETLQQILEDNEL
TNSLDVEPDELKSWESTLLKMSTTTCEINEDLNEILSQDILSYVEEQLQKEGGLKLLDNL
DDIPTLDLQNQSLDQILETNFSWPVETPNQQLIPNGGPMMAPVLGTMKLTHADLPQLNGP
TLQQIASQQQQQQSLVPSVGLNADLGTPAMAFNPSFMDSCAQTQNQLRSLQVAPKDNNNL
GGFSLRQNHHQLLSTLPVGLQDQSAELQLNPVFTFQGNQGNQGRNQWNASSLSNSTQADT
FETYNQNISNAPSCLPSHFALQTQNSDNQRQSWQQQQQQQPISNGHQQMGACINQISGFQ
RNPLPGVTAMPNSINNCAPMFRTAETSNVQFPVKPPSLAPSSSCMFQNTAAAPAPSVPLN
GVHLSQAPPSSCQRLNPPPTSHIPSKPSCFYQGLPGGGAVQGMTPIPNPDPALPSCQMTP
GLDTESLLVQQQQYLNFSDQTQINSRPVVGNGGFPFSSLPNGNAYYSENK
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgctggggaacacggcgctctacgcggtgaagaaacggaagaagccggtccagaaaatc
cccaaaccttcacctcccgatggcgccaagtccaacccttccaaacgccaccgggaccgg
ctcaacggcgagctggacaaactcaccagcctgctgccattcaccgaggaggtcagggct
cggctggataagctgtccgtgctgcgcctcagcgtcggatacctgaaagtcaaaaacttc
ttcaacgccaccataaagaaaggccagaacggcaccagctggagcagcgagcggagcctg
atgttcggcagcaacccgctcactccgtcctccgcctcctccgtcacgtctccttcctcc
tctcagatcacctccatcgacggggtcagcttctccgagggagacctgctgctccaggct
ctgaacgggttcgtgttggtggtgacggctgaaggttacgtcttctacacttcaccgacc
atccaggacttcctcggcttccaccagtcggacgtcgtccatcagagcgtcttcgagttg
atccacacggacgaccgcgctctcttcagacggcagcttcacttcgctctgaacacgcag
agccaacacgacggcagcgtagagagtcccagcgagcagagcagcagcgaggtcaacagc
aacttgatgacgtacgatccgcaggtcgttcctcccgaaaactcgtccttcctggagaga
aacttctgctgtcgcttccgatgtctgctcgacaactcctccggcttcctggctctgaac
ttccgtggccggctgaagttcctccacggtcagaaccgtctgtcggaggatgggacgttg
atcccgccgcagctcgctctgtttgccatcgccatgccgctgcagccgccgtccatcctg
gagatccgcaccaagacgctcatcttccagaccaaacacaagatggacttcacacccatg
ggcgtcgatgccagagggaaagttgttctgggttataatgaaaccgagctctgcaccaga
ggaaccggctaccacttcgtccacgctgccgacatgatgtactgcgccgacaaccacgtg
agaatgatgaaaacaggagacagcggcttcaccgtcttcaggcttcttaccaaaaccggc
acgtggctctgggtccaggccatcgccagggtcatcttcaaaggaggaaaaccagacttc
atcgtggcccggcagagagctttaacaaatgaagaaggagaagaacaacttcgcctccgt
cgtctacagctgccattcgactttgccacaggtgaggcgctgctgtacgacctcgccccg
accgtcgacgtccccgacccgtcccccgccgcgaagcagaggaagatcgacaactactct
gtcagccgcgactccctcctgggctgcatgctgagccaggaccagtccgtctactgcgag
aacaacagcgccaacatcaacgacgtcgccttcaaggacacgcacgccaccgtcaacgtc
cccgtcaacctctggcagcagcagtcctcgcccaaacccgtcgggagccttgtgaaatcg
gagggtacggttcaggacatgatggagaccctgcagcagattttggaggataacgaactc
acaaacagtttggacgtagaaccggacgagctgaagagttgggagagcaccttgctgaag
atgagcaccaccacctgcgagataaacgaagatctgaatgagatcctcagccaagacatc
ctgtcctacgtcgaagagcagctacagaaagaaggcggactcaagctgctcgataacctg
gacgacatccctacattggacctccagaaccagagtctagatcaaattttggagacaaat
ttcagctggcctgtggagacgccaaaccagcagttgatccccaacggagggccgatgatg
gctccggttctggggacgatgaagctgacccacgccgatctccctcagctaaacggtccc
acgctccagcagatcgcctcacaacagcagcagcagcagtctctcgtcccttctgtgggt
ctgaacgctgatttgggcaccccagcgatggccttcaacccttcgtttatggactcttgc
gctcagacgcagaaccagctgaggagcttacaagtcgccccgaaagacaacaacaacctc
ggaggattctcgctccggcagaatcatcatcagctcctctccaccttacccgtcggcctc
caggaccaaagcgccgaattacagttgaaccccgtcttcaccttccaggggaaccaaggg
aaccaggggaggaaccagtggaacgcctcctcgctctccaactcgacacaagccgacacc
tttgaaacgtacaaccaaaatatttcaaacgcaccgagctgcttaccgagccactttgca
cttcagacgcagaacagcgacaatcagagacaatcatggcagcagcagcagcagcagcag
ccgatctctaacggacaccaacagatgggcgcctgcatcaaccaaatttcgggatttcaa
aggaatcccctccccggtgtcaccgcaatgccaaactcaatcaacaactgcgcccccatg
ttcaggactgcagagacttctaatgttcagttccctgtcaaacctccatctctagcacct
tctagcagctgcatgtttcaaaacaccgccgctgcccctgccccctctgtgcccctaaac
ggggtgcacctcagccaggcgcccccttcctcctgtcagagactgaatccccccccaacc
agccacatcccctccaagccctcctgtttctatcaggggcttcccggaggtggggcagtg
caggggatgaccccaatcccaaatcctgatccagcgctaccgtcctgccaaatgaccccc
ggactcgacaccgagagcctgttggtgcagcagcagcagtacctgaacttcagcgatcag
acacagatcaacagccgtccagtcgtcggtaacggaggtttccccttctcctcgctgccc
aatgggaacgcgtactactcagagaacaaatag
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