Scomber japonicus (chub mackerel): 128354550
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Entry
128354550 CDS
T09718
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128354550
04082 Neuroactive ligand signaling
128354550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128354550
Ion channels [BR:
sjo04040
]
Ligand-gated channels
GABA-A
128354550
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
128354550
NCBI-ProteinID:
XP_053170738
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All DBs
Position
24:complement(12471570..12505697)
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AA seq
508 aa
AA seq
DB search
MLALRKVRQFRVFSVLVVGSIVCCAKSVNEPGNMSFVKETVDKLLKGYDIRLRPDFGGAP
VAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYVGIPLNLTLDNRVADQLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGGDTAVTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLK
RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKI
PYVKAIDMYLMGCFVMVFLALLEYAFVNYIFFGRGPQMQKKLAEKAEKANNEKAAKYDAA
RVGWNCRTASLKRSNQVKGLRHSRSVSSHGHGNILLTTLEIHNEVAGGEITTSVADIRNS
QSMVQLDSTASSHIQYRKQSGGIGPRSASRHSLDRAAQIKRSRLRRRSSQLKIKIPDLTD
VNAIDRWSRIIFPSVFSLFNLIYWLYYV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgttggctttgcgtaaggttcgtcaatttcgcgtcttttccgtgctggttgtcggttcc
attgtgtgttgcgcgaaaagcgtcaatgaaccgggcaacatgtctttcgtgaaggagacg
gtggataaactgctgaagggatatgatatccgactgagaccggactttggaggggcccca
gttgcagtcgggatgagcatagacgtggcaagcatagacatggtgtcagaagtcaacatg
gactatacgttgaccatgtatttccagcagtactggagagacaaacgtctagcctatgta
ggaatccctctcaacttgacccttgataatagggttgccgaccagctctgggtcccagac
acatacttcctcaatgacaagaagtccttcgtccacggagtcactgtcaaaaaccgaatg
atccgactgcatccagacggaaccgttctctacggactcaggataactacgacagcagcg
tgtatgatggatctcaggaggtatcccctggatgaacagaactgcactctggagatagag
agctatggctacaccacagacgacatcgagttctactggaaaggaggcgatacagctgta
acgggggtgacacggatcgagttgcctcagttttccattgtcgattacaagctggtttcc
agaaatgttgtcttttccacaggtgcctacccgcgactgtctctgagcttcaagctgaag
aggaacattggctacttcatcctgcaaacatacatgccatcgatcctgattaccatcctc
tcctgggtctccttctggataaactacgatgcgtcggcagccagagtggctctagggatc
accacggtgctgaccatgaccaccatcaacacccacttgcgagagaccctgcccaagatc
ccctacgtcaaagctatcgacatgtacctgatgggctgcttcgtcatggtcttcctggca
ttgctggaatacgccttcgtcaactacatcttcttcggcaggggtcctcagatgcaaaag
aagcttgcggagaaggcagagaaggccaataacgagaaggcggccaagtatgacgctgca
agggtaggttggaattgtaggaccgcatcgctaaaacggtccaatcaggttaaaggtctt
cgccactcacgctcggtgagttcacacggccacgggaacattctgctaaccacgctggag
atccataacgaggtggcgggaggcgagatcaccaccagcgtggcggacattaggaactct
cagtccatggtgcagttggacagcacggcatcgtcgcatatccagtaccgcaagcagagc
ggagggatcggcccgcgctccgccagccgccactccctggaccgcgccgcccagattaaa
cgcagccgtctgcggaggcggtcctcgcagctcaaaatcaaaatccccgacctgacggat
gtgaacgccatcgaccgctggtcacggatcatcttcccctccgttttctcactgttcaac
ctcatctactggctgtactacgtctga
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