Scomber japonicus (chub mackerel): 128354625
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Entry
128354625 CDS
T09718
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128354625 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128354625 (nhej1)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
128354625 (nhej1)
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GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
128354625
NCBI-ProteinID:
XP_053170823
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Position
24:complement(2439047..2471001)
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AA seq
196 aa
AA seq
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MSSRNPPLAAPLPLLQRPWLPVSISGCQLLAKTRFAETSYHILLTDLRSVWEEEMDSAAI
QSRAQELNRRLRAPVKAFFSHLCEVAEPCLSGGGGGGGGGRGGGGGDSEAQISLTRQEDG
NISMRLKSELAGLPFYWEFHCTPAPVTVVCVQLVRPLLAMSRLLQQQVEQLEDLLVRKDA
EIQDYRENGATLSRVD
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccgcaacccccccctcgccgcccccctccccctcctgcagcgcccctggctt
cctgtcagcatcagcggctgccagctgctcgccaagacccgcttcgccgagacgtcgtat
cacatcctgctgacggacctgcggagcgtctgggaggaagagatggactctgctgccatc
cagagccgagcgcaggagctgaacaggcgtctccgagctccggtcaaagctttcttctcc
cacctgtgtgaggtggctgagccgtgcctgtctggaggaggaggaggaggaggaggagga
agaggaggaggaggaggagacagcgaggctcagatctctctgacccgacaggaagacgga
aacatcagcatgaggctgaagagcgagctggccggtcttcctttctactgggagtttcac
tgcacccccgcccccgtcacagtggtgtgtgttcagctggtgcgccccctgctggcgatg
agccgcctgctgcagcagcaggtggagcagctggaggatctgctggtgaggaaggacgca
gagatccaagactacagagagaacggagccacactcagcagagtggactag
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