Scomber japonicus (chub mackerel): 128355069 Help Entry 128355069         CDS       T09718                                  Symbol hcfc1a Name (RefSeq) host cell factor 1a   KO K14966   host cell factor 1 Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo03083   Polycomb repressive complex sjo04980   Cobalamin transport and metabolism sjo05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:sjo00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     128355069 (hcfc1a)  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     128355069 (hcfc1a)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     128355069 (hcfc1a)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:sjo01009]     128355069 (hcfc1a)   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:sjo03036]     128355069 (hcfc1a)    03029 Mitochondrial biogenesis [BR:sjo03029]     128355069 (hcfc1a) Protein phosphatases and associated proteins [BR:sjo01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      128355069 (hcfc1a) Chromosome and associated proteins [BR:sjo03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      128355069 (hcfc1a)    HMT complexes     COMPASS/SET1 complex      128355069 (hcfc1a)     MLL-HCF complex      128355069 (hcfc1a)    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      128355069 (hcfc1a) Mitochondrial biogenesis [BR:sjo03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     128355069 (hcfc1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 fn3 Motif Other DBs NCBI-GeneID:  128355069 NCBI-ProteinID:  XP_053171214 LinkDB All DBs Position 3:complement(11969736..11983759) Genome browser AA seq 1675 aa AA seqDB search MSAPGSAVSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNT ATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKKLK AKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSV VGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDTLTWNK PSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSM CWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERP HAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPIMSASPSQPVNSP KSPAPAAAAPSAQSLPQTAVLKVAAPQAATGTSVVTVRPSQPGKSPVTVTSLPPGVRMVM PAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAVSPGTT TMKVASPVMVSNPATRMLKTAAAQVGTATGSSPTTTTRPIITVHKSGAVTVAQQAQVVTT VVGGVTKTITLVKSPLTSGTLISNLGKMMSVVQTKPVQTSTVTGQASTNPLTQLIQTKGP LPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTIIKTIPMSA IMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLATAAGQQGLTQVVLKGA PGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSSSLA GGTVDSSNASLVTPITTLGTIATLSSQVISPSAITVSAAQTSLTSASTLPSSTITVQNQP TQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGAAGEGSGTVTLVCSNPPCETH ETGTTNTATTSSAAMGAGQVCSNPPCETHETGTTNTATTASSNMSVPRVCSNPPCETHET GTTNTATTASANMGGTQQVCSNPPCETHVTGTTNTATQASSNMNAGQTGTVQRVCSNPPC ETHETGTTNTPSTATSSMGGEQTSTAAGVVQRVCSNPPCETHETGTTNTATTATCSMETG EGTAAQQTEEGAEGTSSTEVASSTAASAMVTTTQGRAITTVTQSTPAPGPSVPSISSITE GVTTAASSTEEPMQTDETASAEAAPAEEGPAAMETQAEGEAAAATALNLPSELMSEGQGA TLMVTGLSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMNESESAGESQQPT NIPIMLTQQELAALVQQQQQLQEAQAAAQQASVDTSLPTEGLAPADSLNDPSVESNGHNE MAAAVTSAVASLLPRTTAETLAPSSTFAPSVSVASPAKLQAAAALAEVANGIEGEKQAPQ PTPVKPVVKKENQWFDVGIVKVTNMVVTHFYVPADDSQGDDDSGIMPDYSQMKKMELQPG TAYKFRVAGINACGRGSFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGK IIEYSVYLAIQSNQTAEAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAII FRIAARNEKGYGPATQVRWLQESGKDAASAKPAPKRPGTSPDTKAAGPKKARTDQ NT seq 5028 nt NT seq  +upstreamnt  +downstreamnt atgtctgctcctggttccgcggtgtcggtcctgcagccgcggtggaagcgggtcctcgga tggtccggtcccgtcccccggcccagacatggacacagagctgtagctattaaggagctc atggttgtctttggcggtggaaacgaagggatagtggatgaattacatgtatacaacacc gcaacaaaccagtggtttatcccagcggtccgtggcgacatcccccccggttgtgctgcc tatggttttgtctgtgatggcacaagattgctggtgtttggtggtatggtggagtatgga aagtacagcaacgatctctatgaactacaggccagcagatgggaatggaaaaaattgaaa gcaaaaaacccgaagaatgggccccctccttgtcctcgtcttggccacagtttttccctg gtgggcaacaaatgctacctgtttggtggattagccaatgacagtgaagacccaaaaaac aacattcccagatacctgaatgatctgtacacactcgagcttcgtgcgggttccagtgtg gttgggtgggatattccaattacatatggagtcctgcctccccctcgtgagagccacaca gctgtggtatacacagaaaagacaagcaggaaatcacgcctgataatctatggagggatg agcggttgtcgtcttggagatctttggacacttgatattgataccctgacatggaataaa ccatcagtaagcggcacagcaccacttcccagaagtcttcactctgccaccaccatcaca aacaagatgtatgtttttggaggatgggttcctttggtaatggatgatgtcaaggtggcc acacatgagaaggagtggaagtgtacaaacactcttgcctgtttaaatctagactcgatg tgttgggagacagtgttgatggatactctcgaagacaacatccccagggctcgtgctggc cattgtgctgtggcaatcaactccagactatatgtttggagtggccgtgatggttatcgt aaagcttggaacaaccaagtctgttgtaaagacctctggtacctggaaacagaacggcca catgcccctgccagggtgcagttagtccgtgccaacacaaattctctggaggtgagctgg ggtgccgtatccacggctgacacctacttgctgcaactgcagaaatatgacatccctgca actccagctgcagcttcaccaatcatgagtgcaagcccctcgcagcctgtgaactctcca aagagccccgcaccagctgctgcagcaccctctgctcagagcctaccacagacagctgta ttaaaggttgcagctccgcaggctgccacaggtacatctgttgtcacagtccgccccagc cagcctgggaaatcccctgtcactgtgacatcccttcctccaggtgtccgaatggtaatg cctgcccagaccacccaaggatcgccaattggaagtagccctcagatgagtggcatggca gctttagctgctgcagcagcagcaacacagaagatcccgccctcgtctgcaggcactgtc ctcaatgttcctgcaggtgccaccattctcaaaactgtagcggtttcccccggcacaacc acaatgaaagtggcatctccagtcatggtcagtaacccagcaacccggatgctaaagact gctgcagcccaggtgggcacagcaactgggtcctctcccaccaccaccaccagacccatc atcactgtgcacaagtctggtgcagtcacagtggcccagcaggcccaggtggtaaccact gtggtgggaggagtcaccaagaccatcactcttgtcaagagtcccctcaccagtggcact ctgatctccaaccttggcaagatgatgtctgtggtacaaaccaagccagtgcagacatca actgttacaggccaggcttccactaaccctctcacacagctcatacagacaaagggtccc ctcccagccggaaccattctgaagctggtgacatctgcagatggaaagcccacaaccatc atcaccacttcccaggcaggaggcacaggaaacaagcccaccatcctcaacatcagtggc gtctctcctaccaccactaaacagggcaccacaatcattaagaccatccccatgtcggcc atcatgacccagcctggagccacaggtgtaacaagcagtgcaggaatgaaaacacctatc acaatcctcaccacaaaggtgatgactactggaactcctggtaaaatcatcactgcggtg cccaaacttgccacagcagctggccagcagggactgacacaggtggttttaaagggtgct cctgggcagccgggaactattttgcgcactgtgcccatgagcacagtaggtggtgtacga cttgttacgccagtgaccgtgtctgctgtcaagcctgctgtcaccacactggttgtcaag gggactactggtgtcaccactcttgggacggtcactggtacagtctcttctagcctggct gggggcactgtggatagctccaatgcatctctggttacccccatcaccacactgggaacc attgctaccttgtccagccaggtcatcagcccatctgcgataactgtgtccgctgctcag accagcctaacttctgcctccacactgccctcctccaccatcacagtgcagaaccagccc acccaggtgactctgatcacaacccccagtggtgtagaagcccaaccagtccaggatcta ccagtgtctatcctggcatcaccaacctctgagcagcccagctccaccgaggctggagcc gctggagagggctcggggaccgtcaccttggtctgctctaacccgccctgtgagacccac gagacgggaaccaccaacacagccaccacctcctctgctgcaatgggagcagggcaggtg tgttcgaacccaccctgcgaaacccacgaaacaggaaccaccaacacagccacaacggca tcttcgaacatgtctgtaccgcgcgtgtgctccaacccaccatgtgagactcatgaaact gggacaacaaacacagctaccacagcatcggctaacatgggaggaacccagcaggtatgc tccaacccaccttgtgagactcacgtgacaggcaccaccaacacagccacccaggcatct tctaacatgaacgcaggccagactggcacagtgcagagggtgtgctccaacccgccatgt gaaacccacgagacagggaccaccaacaccccgtccacagccacctccagtatgggagga gaacagaccagcacagcagcaggcgtggttcagagggtttgctcaaacccaccctgtgaa acacacgagactgggaccaccaacacagctaccactgccacctgcagtatggagacaggc gaaggcacagcagcccaacagacggaggagggagcagaaggcaccagcagcacagaagtg gcctcctccactgcagcatctgccatggttaccaccacccagggcagggcgatcactacc gttactcaatctacaccagctcccggaccctctgtaccttcgatctcatcaatcacagaa ggggtgactactgctgccagctctacagaggaacccatgcagactgatgagacagcgtca gcagaagctgcaccagcagaggagggacctgcagccatggagacacaagcagagggagaa gcagcagcagcgacagccttaaacctgccttcagagcttatgtctgagggccagggagcc acgctgatggtaacggggctgtcggacgaggagctggctgtgactgcagcagcagaggca gctgctcaggcagcagcaactgaagaagctcaggcccttgctattcaggctgtcctccag gctgcccagcaagctgtaatgaatgagagtgaatcagctggagagagtcagcagcctacc aacatccccatcatgttgacccagcaggagcttgcagcactggtccagcagcagcagcag ctgcaggaggctcaggctgctgcccagcaggcctccgtagacacaagcttgccaactgag ggtcttgcccctgctgacagcctcaacgatccttctgtcgagagcaatggacacaatgag atggctgctgcagtcactagtgctgtggcgtctctgctgccacgcaccacagctgagaca ctagctccatcaagtacgtttgcgccgtctgtatcagtggcaagtccagccaagctgcaa gcagcagctgctctagcggaagtcgccaatggcattgagggagagaaacaagctcctcag ccaaccccagtgaagcctgttgtaaagaaagagaaccagtggtttgatgttggaatcgtt aaagtcacaaatatggttgtcacccacttttatgtgccagcagatgattctcaaggagat gatgactctggcatcatgccagactacagccagatgaagaaaatggagctgcagcctgga acagcttataagttccgtgttgctggaatcaacgcttgtggtcgtggatctttctcagag atatctgcgtttaagacttgcctaccagggttcccaggtgcaccttgtgccatcaaaatc agcaagagcccagatggtgcccatctgacctgggagccaccctcggtgacgtcagggaag atcattgagtactctgtgtacctggccatccagagcaaccagacagctgaagcgaaggcc tccacccccgcccagctagcctttatgcgtgtgtactgtggacccaacccctcttgcctg gtgcagtcgtccagcctctcgaacgcccacatcgactacaccaccaagccagccatcatc ttccgcatcgctgcccgcaacgagaagggctacggtcccgccacccaagtccgatggctg caggagtctggtaaagacgctgcctctgcaaaaccggcccccaaaagaccaggcacctct cccgatactaaggctgctggtccaaagaaagcaaggacggaccagtga

DBGET integrated database retrieval system