Scomber japonicus (chub mackerel): 128355073
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Entry
128355073 CDS
T09718
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128355073
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
128355073
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
Contactins
128355073
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
Others
128355073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_4
Ig_C17orf99
C2-set_3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
128355073
NCBI-ProteinID:
XP_053171222
LinkDB
All DBs
Position
3:complement(8227155..8268374)
Genome browser
AA seq
1031 aa
AA seq
DB search
MLLPWELLILLSLKECLAGEMPKNARHGPVFTQEPSDSIFPLSTDDKLVFINCKAKGNPP
PRYRWKVDGREINTESDQNYSLVEGNLLINNPHVINHGGVYQCIATNSFGTILSREAKVQ
FAFLQNFSRKSRNTVSVREGQAVVLLCGPPPHYGEIKYSWVFNGQRSFLQQDVRRFISQW
TGNLYIAKVEASDAGNYTCVVRNMMTNATVFSSPTPVVVRRDVVMGEYEPKIEVQFPDTL
HVSKGSSVRLECFALGNPVPSITWRRADGNPLPGKIKINHSSGVLEIPYFRPEDAGVYEC
VAENSRGRNVARGQLLFHNVEHLHWLQTLKDAHMAIGANLQWECKAIGKPRPTYKWLKNG
QLLLAEGRIHVDTGKLTISRISLSDSGMYQCVAENEHGAVYASAELKVVASPPDFTWRPV
KKSTVIQRGGEVVLECRPHASPKATTSWWRGGELLKDSKRQTIMEDGTLRITNISKSDGG
RYTCVARNHFGTSSSTGTIMVKEPTKIIVPPLSLDATVGQSLVLPCEVSSDSSLSPVFKW
FFNGKPIDFNRQEHFAMIGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRG
PPGAPEGLVVTDITDATVQLSWGSGSDNHSPVTMYMVQARTPFSIGWQTVRTVPDSVPGQ
MMHATVKDLNPWVDYEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPVNVSGGGGARGE
LVIMWEPVPEEQQSGEDFGYVVAFRPLGSNTWIQTVLASPDASRYIYRNDSIAPLSQFEA
KVGVYNSIGEGPFSRVVKVFSAEEEPTDAPSRVWARTVSASEIEVYWEPIPPGSSSEKIL
AYEVLFWEKGFQQSEAERVRVIDTTALLSGLKGSTVYLISVRAQNSAGLGPCSPAFNITT
KKPPPSQPPGNIEWNLTNSKISLNWEHVKAMENESEVTGYKVVYRQNWHGRTTVLETNKT
SVELQIPSGEDYLIEIKALTKGGDGTSSGPIRIPKMSSKFQIVCSMQMNRVGIKQRSTGM
GAPCVTNPSCD
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgccatgggaactgttaatccttctgtcactcaaagagtgcctggctggtgag
atgccaaaaaatgctcgacatggtcctgtcttcacacaggagcctagtgacagtattttc
ccactgagcactgatgataagctggtgtttattaattgcaaagcaaagggaaatccacct
ccacgttataggtggaaagtggatgggagagaaataaacacagagtcagatcagaactac
agccttgtagaggggaacctgctgatcaataaccctcatgtcatcaatcatggaggagtg
tatcagtgcatcgcaactaactcatttgggaccattctaagcagggaagcaaaggtccag
tttgcatttctgcagaacttcagcaggaagtcaaggaacacggtatcggtgagagagggt
caagctgtggttctgctctgtggccctccaccccattatggagagataaaatattcatgg
gtattcaatggacagcgcagtttcctgcaacaggacgtccgtcgttttatctctcagtgg
actggaaacttgtacatagccaaagttgaagcctcagacgcagggaactacacatgcgtg
gtgagaaacatgatgaccaatgcgacagtgttcagctctccaacccctgtggtggtgcgg
agggacgtagtgatgggtgaatatgagccaaagattgaggttcagtttcctgacaccctt
catgtttctaaaggatcatcagtgaggctggaatgctttgccttaggaaaccctgtgcct
tcaatcacttggagaagagctgatggaaacccactccctggcaagattaaaatcaaccac
tccagtggggttctggaaattccatattttcgcccggaggatgccggtgtgtacgagtgt
gtagccgaaaacagcagaggacgaaatgttgccagagggcaacttttattccacaatgtt
gaacatctgcactggctccagacactgaaagatgctcatatggcaattggagctaatctg
cagtgggaatgtaaagccattggcaaacctaggcctacatacaaatggttgaagaatggt
cagctactactggcagaggggaggatccatgtggacactggtaaactgacaatatcccgg
attagtctgtcggactctgggatgtatcagtgtgtggcagagaatgaacatggagccgtc
tatgccagtgctgagctcaaggttgtagcctctccacctgacttcacctggcgccccgtg
aagaagtccacagtcatccagagggggggtgaggtggtcttagagtgtcgcccccacgct
tccccgaaggccacaacctcctggtggagagggggtgaactcctgaaggacagcaagaga
cagactatcatggaggatggaactctgaggatcaccaacatcagcaaatcggacggaggc
aggtacacatgtgtggccaggaaccattttggaacatctagcagcacaggaaccataatg
gtgaaagagcccacaaagatcattgttccacccttgagtttggacgccactgtgggtcag
agccttgtgttgccatgcgaggtgtccagcgattcctctctaagccccgtcttcaaatgg
tttttcaacggcaaaccaattgatttcaacaggcaggagcactttgccatgattggaggg
ggatttgctggtgacctgatggtgaggaacatccagctgaagcattctgggaagtacgtg
tgcatggtacacactgaagtcgacaccgtctcagcagcggcagacctaattgtcagagga
cctcccggtgccccggagggcctggtagtgactgacattactgacgccactgtgcaactg
tcctggggctctggatccgacaaccacagtcctgttaccatgtacatggtgcaggctagg
acccccttctctataggctggcagactgtgaggacagttcctgattctgtgcctggacag
atgatgcatgcaacagtgaaagatttgaacccctgggtggattatgaattcagggtggtg
gcaatcaacagtgttggtgttggagaacccagcacgccatcaaaacagattcgaaccaaa
gcagcagttcccaaggttgcaccagttaatgtgagtggtggtggaggggctcgaggagaa
cttgtcatcatgtgggagcctgttccagaggaacagcagagcggagaggactttggctat
gtcgtggctttccgcccacttggcagcaacacctggattcagacagtgctggcatcacct
gatgcatcaagatatatttacagaaacgacagcatcgcacctctgtcccagtttgaagcg
aaagtgggagtctacaacagcattggagaggggccgttcagccgtgtcgttaaagtgttt
tcagcagaggaagagcccaccgatgctccgtcaagagtgtgggctcgaacagtgtcagcc
tctgagatcgaggtgtactgggaaccaattccccctgggtccagcagtgagaagatcctt
gcatatgaggttctcttctgggagaaaggatttcagcagagtgaagcagagagagtgagg
gttatcgacaccacagctctactctctggcttgaagggcagcacggtatatctgatctca
gtcagagcccaaaacagcgctggacttggaccctgcagccctgcttttaacatcaccacc
aagaaacctccaccaagtcagcccccagggaatattgagtggaacttgaccaactcgaag
atctctctaaattgggaacacgtcaaggcgatggaaaatgagtctgaggtgacaggatac
aaggttgtgtatcgtcagaactggcatggtaggactactgtactggaaaccaataagacc
agcgtagagcttcaaatcccctccggagaggactacctcattgagatcaaagctctgacc
aaggggggcgatggcaccagcagtggccccatccgcataccaaagatgtccagtaagttt
caaatagtctgcagcatgcaaatgaatagagttggaattaagcagaggagcactgggatg
ggagcgccgtgtgtaactaatccctcgtgtgactga
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