Scomber japonicus (chub mackerel): 128355074
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Entry
128355074 CDS
T09718
Symbol
magi1b
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128355074 (magi1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
128355074
NCBI-ProteinID:
XP_053171223
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All DBs
Position
3:complement(9880137..10003173)
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AA seq
1704 aa
AA seq
DB search
MSKPALKKNHWTSRVNESSVCKDARGDLNVPLNGGAENGEFAYIGQVNEDVVVYKSGKLT
EGDLLLEVENLSISGLPLYDVQTVIKNCKGPVRLKTVRQGSKLNKDLKHYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRPPREGEVSGVDYNFLSVEDFLELEKSGTLLEIGTYEGN
YYGTPKPPVQPPGGKVISNSSSGGDAPLPDGLSGSLPGSQHSTPRRSKSYNDMHNAGIGP
GEQQQEDDEDLPDMNSSFTGDSSELDEIHHSVRPFAPRQSEPSYPGTTPSPPSTTESTQQ
SHPHLSHPPPEDPLGPLPDNWEMAYTENGEVYFIDHNTKTTSWIDPRCLDKPQKPLEECE
DDEGVHTEELDNDLELPPGWEKIDDPVYGVYYVDHINRKTQYENPVLEAKRRRQLEQQPQ
QPQPQSQQPPEGERYIREWIEDSALAGAPLANYAANHQETYRDPQTGPPVPNAMGQKRGK
PFFTRNRSELKGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETG
DVIVSVNDTCVLGYTHAQVVKIFQSIPIGSMVNLELCRGYPLPFDPDDPNTSLVTSVAIL
DNKEPIIVNGQEASNSYDSPSSHGSHSNTNGSTNGGAPLNGLPRPHSPSAEVASDTSSQH
GYPSDVVTLASSIATQPELITVHMEKGDKGFGFTIADSLGGGGQRVKQIVDYPRCRGLRE
GDIIVEVNKRNVQSMSHNQVVDLLSKCPKGSEVTMLVQRGVAPAKKSPKLQLSRKDSQNS
SQHSVSSHRSAHTDSPVHPSLAPPLSESVAPPPPSQPLPGLPPQDSPADGTIQRKPDPFK
IWAQSRSMYESRLPDFQEQDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADEDGR
LRSGDELICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKTSYGVKAEGDVPPSPAS
SHHSSTQAPSLTEEIGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGGGGAGGSGNTVVP
VVAAAAAAVATSSQPPNVVSTVPISALQPYDVEIHRGENEGFGFVIVSSVSRPEAGTTFG
RIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNA
SLLTNAEKIATITTTHTPQQQAAPEARNNTKPKQESYEFKAPPGPPPQPPTQAQDAEFYS
VDLERDNKGFGFSLRGGREYNMDLYVLRLAEDGAAVRNGKMRVGDEILEINGESTKGMKH
ARAIELIKSGGRRAHLVLKRGDGSVPEYDGSPDDGNAANPASGLQNAAEVNALLSTDAPL
ESSYPPEPNQPSQSKKEPSRHSTGTGRHHHSNQRHRSPNKKTSTGKHKGRKSAGKDKKKD
DKGKDGHRHHSSGQHRSRHRSPDKAHKRTHSAENTLDSRHRGHRHGRSPDRRRGHQSPTR
HRSPNRPSHQHRSPHRSRHHSPTRRHAHSSDPYRRRASPERSRGHGNNKPNGVEAVLKEP
PKTPEPSLPLEDSILREPPALDRLNREATLPPLRREERLFEDDSLLLRASSMDRAYRGGG
DSLLRDLASRGQRDPYREATLPRVRTPDSDSAYKRYSSLLRGRSPERTEREGRYASRGSS
PELLYRSRSLGRDISPVRSLGRDISPVRSFRRDDSEDEEDDDNFVAAKVREYYSTLKSNT
SRSPKPTIPEPKKTYKENPKDLSI
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacccgctttaaagaaaaaccactggacatccagagtgaacgagagctcggtg
tgtaaagatgcccgtggtgacttgaacgtgccactgaacggcggcgctgagaacggagag
tttgcctacatcgggcaagtgaatgaggatgtcgtggtttacaaaagtgggaaattaact
gaaggggacctgctgctggaggtggagaacctctcgatttcaggattacccttgtacgac
gtgcagacagtcataaagaactgcaaaggtcccgtcaggttgaaaactgtcagacaagga
agcaagctcaacaaggacctgaagcactatctgagccagcgcttccagaagtcctcgccc
gaccacgaactgcagcagaccatacgagataacctctaccgtcacgccgtgccttgtaca
acccgccccccacgtgaaggtgaagtttctggcgtggactacaacttcctctcagttgag
gactttctagagttggagaagagcggaacccttttggagatcggaacatatgaaggtaac
tattatgggacgcccaagccaccggtgcagccccccggtgggaaagtgattagcaatagc
agcagcggcggtgatgccccactgccagacggactcagcggtagcctgccgggctcgcag
cactccacaccccgacgctccaagtcctacaatgacatgcacaatgctggaatagggcct
ggagagcagcagcaggaggacgacgaggacctccctgacatgaatagtagctttacagga
gactccagtgaattagacgagattcatcactcggtgcgacccttcgcccctcgccagagt
gaaccgtcctaccctgggacaaccccctcaccaccgtccaccacggagagcacacagcag
tcacaccctcacctgagccatcctccccctgaggacccattgggacctctgcctgacaac
tgggagatggcctacaccgagaacggagaggtctacttcatagaccacaatacaaagacc
acctcttggatagaccctcggtgcctggacaagcctcagaaacccctggaagaatgtgaa
gatgatgaaggggtccatacagaggagctggacaatgacttagagcttcctccaggatgg
gaaaaaatagatgatccagtgtatggggtctactatgttgatcatatcaacaggaagacc
cagtatgagaatccagtgctggaggctaagaggcgcaggcagctggagcagcagcctcag
cagcctcagccccaaagccagcagccacctgaaggtgagcgctacatccgagaatggatc
gaggactcggcgttggcaggggccccactggccaactatgctgccaaccaccaggagacc
tacagggaccctcagacaggacccccagtgcccaacgcgatgggacaaaagcgagggaag
cctttctttactcggaaccgatcggagctgaaggggactttcatcaataccaagctgaaa
aagagtcgccggggtttcggtttcactgtcgtgggaggcgacgagccagacgagttcctg
cagatcaagagtctggtcctagatggtcctgccgcactcgatggcaagatggagacaggt
gatgtgatagtgagcgtcaatgacacgtgcgtgctaggttacacacatgcccaagttgtg
aagatcttccagtccatcccaatcggctccatggtcaacttggagctgtgtcgtggctac
ccgttgcccttcgaccccgatgaccccaacacaagcctggttacctcagtggccattctt
gacaacaaggagcccatcatcgtcaacggccaggaggcctccaacagctacgactcgccg
tccagccacggcagtcatagcaacaccaacggctcgacaaatggcggagctccgctgaac
ggcctcccccgacctcacagcccctctgcggaggtggcttccgacacctcttcccaacac
ggctaccccagcgatgtggtcaccctggcctcatccatcgcaacacaaccagagctcatc
actgtacacatggagaaaggagacaagggctttggcttcaccatcgccgacagtctcgga
ggtggagggcagagagtcaagcagatcgtggactacccacgctgccgcggcctcagggag
ggtgacatcatcgtagaggtgaacaagagaaacgtacagagcatgtctcacaaccaggtg
gtcgacctgctcagcaagtgtcccaaaggaagcgaggtcaccatgctggtgcagagaggg
gtggcacctgcaaagaagagcccaaaactgcagttgtcaaggaaggacagtcagaacagc
tcccagcatagcgtctccagccaccggagcgcccacacggactcgcccgtgcacccgtcc
ctggcaccccctctcagcgagagcgtcgctcccccgcccccgtctcaacccctgccaggc
ctgccgccccaggactccccagcagacgggaccatccagagaaaaccggacccctttaag
atctgggcccagtcaaggagcatgtatgaaagtaggcttccagacttccaggagcaggac
attttcctgtggaggaaggacacagggtttggcttcaggatcctgggtggaaatgagcct
ggggagccgatatacatcggccacatagtgaagtacggcgctgcagacgaggacggacgc
ctgaggtccggcgatgagctgatatgcgtggatggcacggcggtggtgggcaagtcgcac
caactggtggtgcagctgatgcagcaggcggcgaaacagggtcacgtcaacctcactgtg
cgacgtaaaacaagctacggcgtcaaagcagagggagacgttcctccgtcgccggcgtcc
tcccaccacagcagcacccaggcgcccagcctgacggaggagatcggaaagcgcaccccg
cagggcagccagaactccctcaacaccgtcagctccggcagcggctccacctccggcatc
ggcagcggaggaggaggagggggcggaggggccgggggcagcggcaacacagtggtcccc
gttgtagcagcagcagcagcagccgtcgccacctcctctcagccccccaacgtcgtctcc
accgtccctatatccgccttgcagccctacgacgtagagatccaccgcggcgagaacgaa
gggttcggttttgtcattgtgtcgtcggtgtcacggcccgaagccggcaccaccttcggc
cgcatcatcgagggaagcccggcagaccgctgcgggaagctgaaagtgggcgatcgcatc
ctggcggtgaacggatgctccatcaccaacaagtcgcactctgacatcgtcaacctcatc
aaggaggccgggaacacggtcacgctacgcatcattcctggagacgagtcatcaaatgcg
tctttattgaccaacgcggagaagatcgccactataaccaccactcacacacctcagcag
caggctgcacctgaggccaggaacaacaccaaaccaaaacaggaatcatatgaattcaaa
gcccctccaggccctcctccccagcccccaacacaagcccaggatgcagagttctactca
gtggacctggagcgagacaacaaaggctttggcttcagcctgcgaggaggcagagaatac
aacatggacctgtacgtgctgaggctagctgaggacggagcagctgtccgcaacgggaag
atgagggtcggcgacgaaatcttggagatcaacggcgagagcaccaagggcatgaagcac
gcgcgagccatcgagctcatcaagagcggaggccgacgcgcccacctggtgctcaagagg
ggcgacggctcggtgcctgaatatgacggcagccccgacgacggcaacgcagccaaccca
gcctcagggttacaaaacgctgcggaagtgaacgccctgctctcaaccgacgcaccactg
gagtcaagctacccaccagaacccaaccaaccatcccagagcaagaaggagccgagccga
cactcaaccggcaccggcagacaccaccattccaaccaacgccaccggtcccccaacaag
aaaaccagcacgggaaaacacaaggggaggaagtccgcggggaaggacaagaagaaggac
gacaaggggaaagacggccaccgccaccattccagcgggcagcaccgtagccgtcaccgt
tcgcccgacaaggcgcacaaacggacgcacagtgcggagaacaccctggatagccgtcac
cggggacaccgccacggccgctcccccgacagacgccgcggccaccagtccccaactcgc
caccgctctcccaaccgcccatctcaccaacacaggtccccccatcgctctcgccaccac
tcgcccaccagacgccacgcccactcctcagatccctaccgcaggcgcgcctccccggaa
agatcaaggggacacggcaacaacaagcccaacggggttgaggccgtattgaaggagccg
cccaagactcctgaacccagcctccccctcgaggacagcatcctccgcgaacccccagcc
ctggaccgcctgaacagggaggcgacgctaccgccgctacgcagggaggagcgcctgttt
gaggatgacagcctgctgttgagagcctcctccatggatagggcctacaggggaggaggg
gacagcctgctgagggacctggcatcccgtggccagagagacccctacagagaagccacc
ctacccagagtgcgcacacccgactcagattcagcctacaagaggtacagctcgctgctg
agggggcgctcacccgagaggacggagagggaggggcgctacgccagccgtggcagttcc
ccagagctgctgtacagaagccgcagcctcggacgagacatctccccggtcagaagcctc
ggacgagacatctccccggtcagaagcttcaggagggacgactcagaggacgaagaggac
gacgacaatttcgtggcggcgaaggtgagagaatactacagcacgctcaagagcaacacc
agtcgctcgcccaagcccacgattcctgagcccaagaagacctacaaggaaaaccccaaa
gacctgagcatctga
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integrated database retrieval system
