Scomber japonicus (chub mackerel): 128355102
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Entry
128355102 CDS
T09718
Name
(RefSeq) leucine-rich repeat-containing protein 49
KO
K16606
leucine-rich repeat-containing protein 49
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sjo03037
]
128355102
04812 Cytoskeleton proteins [BR:
sjo04812
]
128355102
Cilium and associated proteins [BR:
sjo03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
128355102
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
128355102
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_LRWD1
LRR_NXF1-5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
128355102
NCBI-ProteinID:
XP_053171315
LinkDB
All DBs
Position
1:10966735..10999186
Genome browser
AA seq
760 aa
AA seq
DB search
MESEQGAGRTMHKHNNNSGNHKWLFLTPMVNSCKLHLTTVKSLAPEKGQRMVSHGQDHTS
LTGGAPSLSAHEARDKSKRPTHSAGGSCYRNSLNLHKPAGGSGVHKYNAVPGSLLTRLQC
DSFASNFQRMDFDRHSLEECPQLGFMDELQLLNLQHNLITRIQHLSHLQQLVFLNLYDNH
ISEMTGIEALSSLRILMLGKNRIHNICCLGGLSKLNILDLHDNQICRIENVSHLSELRVL
NLAGNRISRVENLQGLDCLNELNLRHNCISIVTEVERLPCLQRLFLSCNNITSFNQLACL
GESCSLSELTLDGNPVALETWYKQAVLRCVLHLRQLDMKRITDEDRRMAGVQARKEEEKK
RESHKQTIHKEKRRLAIRNAAQQWEGVRACLELPPTNGAKDDVSPENSPAHTPAQTNGLV
QEPSPDEPRRVSPGSGPERPPGGTENRLRTNSRPNSPRDPKLVEAGSGSVQSLSLSDNHL
AELDGDTLRLFGLGALEALERGWGVQTAGAVTVITFRYINFDAIVPTLPRIRVKFPNLSH
LIFLETNISRLPQLAALAQVRRLDQLTIHPEGNLVVSLALWRSFVIYRLHHLNLQRINGQ
EVTMNDVIAAERVFGTLGHIAATETPRCRLLLLLEESRKRQLQFLLEGRGRRAGLSPEEL
RDNGKLLGEGLSRALFNYPSRDCSAESPEEGTVESSERAAMIQQYLQELVQRASDTNLKG
EALHKLWPSMFAEMVRDCVFEMRDRTAFRQASLAKLSETK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggagcagggtgcgggcagaacaatgcataaacacaacaacaacagtgggaac
cataaatggctgtttctcacccccatggttaacagctgcaagttgcaccttacaactgtc
aaatcattagcaccagagaaaggccagaggatggtgagtcatggccaggaccacacatca
ctgacaggtggtgctccaagtctttctgcgcatgaagctagggacaaatccaagagacca
acccacagtgcagggggctcatgctaccgtaattccttaaaccttcataaaccagcaggt
ggctctggagtacataagtacaatgcagttcctggttctctcctcactcgtttgcaatgt
gacagttttgcatccaattttcaacgaatggacttcgacaggcacagtctagaagaatgc
ccccagcttggctttatggatgaactgcaacttctcaacctccaacacaatctgatcaca
aggatccagcatctgtcacatttgcaacagctcgttttcctgaacttgtatgacaatcac
atctctgaaatgactggcattgaagctctaagctctctcaggatccttatgctggggaag
aacagaatccacaatatatgctgccttggaggactgtccaaactgaatatcctggatttg
catgacaatcagatctgcagaatagaaaacgtgtcacatctgagcgagctgcgggtgttg
aacctggcaggaaacaggatctcaagagtggaaaacctacagggcctggactgtttaaat
gagctcaacctacgacacaactgcatctctattgtgactgaggtggaacgcctgccctgc
ttgcagcgcctctttctcagctgcaacaacatcaccagttttaatcagctagcctgcctc
ggagagtcgtgctccctttctgagctcaccctggatgggaatcctgtagccctggagaca
tggtacaagcaggccgtcctgcgctgtgtgcttcatctgagacagctggacatgaagcgc
atcacagacgaggatcggcgcatggctggtgtgcaagctcgaaaagaggaggagaagaag
agggagagtcacaagcagaccattcataaggagaaacggcgtctggcaatccgtaatgca
gcacagcagtgggagggtgtcagggcctgcctggaactgccaccaacaaacggagctaaa
gacgatgttagtccagaaaacagccctgcccacacccctgcccagaccaacggccttgta
caggagccttctccagatgagcctagacgggtaagcccaggttctggaccagaaaggcca
ccagggggaacagagaacagactccgcaccaacagccgtccaaacagcccacgagatcct
aagcttgtggaggcagggagcggcagtgttcagagtttgtcgctctctgacaatcacctg
gcagagctagatggagacaccctgcgtttatttggcctgggagccctggaggccctggag
aggggctggggagttcagactgctggtgctgtcactgtaataaccttccgctacatcaac
tttgacgccattgtacctacgctgccacgaataagggtcaagttccccaatctatcgcac
ctaatcttcttggaaaccaacatcagccgtctgccccagctggcggccctggctcaggtg
aggcgtctggatcagctgaccatccaccccgaaggtaacctagtggtcagcttggctctg
tggcgctcctttgtcatctaccgcctccaccacctcaacctgcagaggatcaatggccaa
gaggtaaccatgaatgatgtgattgctgcagagcgtgtgtttgggacgttgggtcacata
gcagccactgaaactccacgttgccggctccttctgctgctagaggagtccaggaagcgt
cagctgcaattcctattggaggggcgtggccggcgggcaggactgagtccggaggagctg
cgagacaacgggaagctcctaggagaaggcctgagcagagcgttgttcaactatccaagc
cgagactgcagtgcagagagccccgaagagggcactgtggagtcatcagagcgtgctgcc
atgatacagcagtacctccaggagttggtccaaagggcctcagacaccaatctgaagggc
gaggctcttcacaagctctggccctccatgtttgcagagatggtgagggactgtgtgttt
gagatgagggaccgaacggccttccgccaagccagccttgcaaagctctccgagaccaag
tga
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