Scomber japonicus (chub mackerel): 128355146
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Entry
128355146 CDS
T09718
Symbol
asic1b
Name
(RefSeq) acid-sensing ion channel 1B isoform X1
KO
K04829
acid-sensing ion channel 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128355146 (asic1b)
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
128355146 (asic1b)
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GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
128355146
NCBI-ProteinID:
XP_053171340
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Position
3:26118036..26283930
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AA seq
560 aa
AA seq
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MPVRIMCTISFSADDEPGRGYGKDGFDDHYKWVKRSNGDGDSQEYLDRNSQMEDYNDEEE
DVGQVDDLATFFSGCSLHGANHMFVKDKKFSFRQGFWAVVFTMALSAFLFQVFDRVLYYL
SYDYITMLDERVANNMTFPAVTICNYNFIRKSQISYKDLVFMGPLLGFEDGMAPGFPLAQ
EPERPLGYRFSMDEFYNRTRHRIEDILLECDFRGLECGPENFREIFTRYGKCYTFNSGQD
GRPLMVTMKGGMGNGLELMLDIQQDEYLPVWGETDETSFEAGIKVQIHTQEEPPFIDQLG
FGVAPGFQTFVSCQEQRLTYLPPPWGDCKATAMDSDFFNSYSITACRIDCETRYLVENCN
CRMVHMPGDAPYCTPEQYKECADPALDFLVERDNDYCVCETPCNLTRYGKEMSFVKIPSK
ASAKYLAKKFNKTEQYIADNILVLDIYFEALNYETIEQKKAYELAGLLGDIGGQMGLFIG
ASILTILELFDYLYEVIKYKLCRCVKKKHKGRNNNDRGAVLSLDDVKRHAPCENLRTPSS
YPGNMLPHHPGQGNFEDFTC
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgccagtccggatcatgtgcaccatctccttttctgccgacgatgagcccggcaggggg
tacggtaaagacggttttgacgaccactacaaatgggtaaagagaagtaacggagatgga
gactcgcaggaatatctggataggaatagtcagatggaagattacaatgacgaggaggag
gatgttggccaggtggacgacctggcaacatttttcagtggttgttcgcttcatggcgcc
aaccacatgtttgtgaaggacaaaaagttcagtttccgccaaggtttttgggcggtggtg
ttcaccatggctctgtccgctttcttgttccaggtatttgacagggttctgtattatctt
tcatatgattacatcaccatgctcgatgagagagtggccaacaacatgacctttccggcc
gtcaccatttgtaactacaactttattcggaagtctcagatcagttacaaagacctggtt
ttcatgggccctttgctgggcttcgaggacggcatggctccggggtttccactcgcccag
gagcctgaacgcccgctgggctatcgcttcagcatggatgagttctataaccgcacccgg
caccgcattgaggacattctgcttgagtgtgacttcagaggcttagagtgcggacctgag
aacttccgagagatcttcacacgctatggaaaatgctacaccttcaattcgggccaagat
ggacgacccctgatggtgacaatgaagggtgggatgggcaacggtctggagctgatgctg
gatatccagcaggatgaatatttgcctgtgtggggagagactgacgagacatcatttgaa
gcagggatcaaagttcagatccacacccaagaagagccgccgttcatagaccagctgggc
ttcggagtggcgccggggttccagacctttgtctcctgtcaggaacaacggctgacgtac
ttacctcctccatggggggactgcaaggccacagccatggactcagacttcttcaacagt
tacagtatcacggcctgccgaatcgactgtgagacccgatacctggtggagaactgcaac
tgtaggatggtccatatgcctggagatgccccatactgcaccccggagcagtacaaggag
tgtgcagatcctgccttggactttcttgtcgagagagacaatgactactgtgtgtgcgag
acaccatgcaacttgacgcgctacggtaaagagatgtcctttgtcaagatacccagcaaa
gcatctgccaagtacctcgcaaagaaattcaacaagacagagcagtacatagctgataac
attttggttctggatatctactttgaagccctgaactatgaaaccattgagcaaaagaaa
gcctacgaattggcaggcctcctgggtgatattggaggtcaaatgggtcttttcattgga
gccagcatcctcaccattctcgaactctttgactatctatatgaggtgatcaaatacaag
ctgtgccgatgcgtgaagaagaaacacaaaggccgcaacaacaacgaccggggagctgtg
ctgagcctggatgatgtgaaacgccatgctccttgtgagaacctgcgtacaccatcgtca
tatcctggcaacatgctacctcatcacccgggccagggtaactttgaagacttcacttgc
tga
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