Scomber japonicus (chub mackerel): 128355174
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Entry
128355174 CDS
T09718
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04260
Cardiac muscle contraction
sjo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128355174
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
128355174
04261 Adrenergic signaling in cardiomyocytes
128355174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128355174
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128355174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
VWA_CoxE
dCache_2
Motif
Other DBs
NCBI-GeneID:
128355174
NCBI-ProteinID:
XP_053171389
LinkDB
All DBs
Position
3:20202625..20233696
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AA seq
1096 aa
AA seq
DB search
MAIGRRSCSIVCLVSIQIILIFSASWPGAEGLTFPQQYTIMHWARRIEQEIDTVFQHITG
AQQLKGIYNEERRRFSVVRNQPRKIVEKVASDIEKLLAKKRKALDRLASEAERLQREHLW
QDGIKELDMAYYDSKAELDYYSMDGEGEVENPSHIKLEFVYDPNFKNNVNYSYTAVQIPT
DIYKGAPVILNELNWTQALEKVFMENSREDPSLLWQAFGSATGVTRYYPASPWKAPDKID
LYDVRRRPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVMEMLDTLSDDDYVNVARF
NEKAEAVVPCFKHLVQANVRNKKIFKDAVQQMQAKGTTDYKSGFHFAFNQLLNKTNVPRA
NCNKIIMLFTDGGEDRAQDVFMQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACTNKGYYF
EIRSICAIRINTQEYLDVLGRPMVLAGSDAKQVQWTNVYQDALGLGMVVTGTLPVFNLTM
DGNSQNQLILGVMGVDVHLDEIKRLTPRYNLGANGYIFAIDPNGYLLLHPNLQPKLVNLP
EPVTLDFLDAEVEDSNKEEIRRQMIDGRPGDMQIKTLIKSIDEQYIDEVHRGYTWTPING
TDYSLGLVLPPYNEYYIQADLSDVMLQLQYMQSLLPSSFESSGHVFLAPREYCKRLHLSD
NNTQFLQNFLSLMLDISPESDECDQGLIHNLILDSRIIGQLASRVWKNKDLNSYGFLAVF
ASTDGGITRVFPNLASELWDEDPEPFNSNYYRRSLDHKGYMFRAPSRGSMDDPAVAENGT
VGIVVSSAIEVNLGGKLLKPAVVGVKLDLEAWVDKFKILASNVSDNRQGSHKCGPSRSCE
MDCEVNTDDLLCYLIDDGGFLVMSNQRDHWKKIGLFFGDVDPYLMHALYNNSIFTRRQSF
HYQSACEPVSSSHTGAAPRGIFVPSIADILSLAWWTSTLAWSVMQQLLYGLAYNSWLYRD
DVLVEGFETKESSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHAKRIENTNLLFVVAET
LPCSSCEIERLTQVRTEFQEENPCEVLSNARYRKGPASCFDYSALENTSECGRGHSLQSS
IGVLLFIQLLLPVFHL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcgataggcagaaggtcttgcagcatcgtctgcttggtatctatccagatcatcttg
attttcagcgcatcgtggcctggagcggagggtctcacattcccccagcaatacacgata
atgcactgggcccggcgtatcgagcaggagattgacacagtctttcagcacatcactgga
gctcagcagttgaaagggatatacaatgaagaaagaagaaggttcagtgtggtgaggaat
cagcctcggaagattgtggagaaggtggcctcagatatagagaaacttctggctaagaag
cgcaaagcccttgataggttagccagtgaagcagagcggctgcagagagagcatctatgg
caggatgggataaaggagctagacatggcatattatgactccaaggcagagctggattat
tattccatggatggagaaggagaggtggaaaatccttctcacatcaagctggagtttgtt
tacgatccaaatttcaaaaacaatgtcaactactcctacacggctgttcagattcccaca
gacatttataaaggagctccagtcattctgaatgagctgaactggacacaggcgctggag
aaggtgttcatggagaacagtcgggaggacccgtcgctgctgtggcaggcatttgggagt
gcaacaggagtcacccgctactacccagcttcaccttggaaagctccagataaaattgat
ctgtatgatgtcaggaggaggccctggtacatccagggtgcctcatcccccaaagatatg
gtcattcttgttgatgtgagcggcagtgtcagcggactcaccctgaaactgatcaaggcg
tcagtgatggaaatgctggatactctgtctgatgatgattatgtcaacgtggctaggttt
aacgaaaaggctgaggcggtggtgccttgcttcaagcatctagtccaggctaacgtgcgc
aacaaaaagatcttcaaagatgcagtgcagcagatgcaggctaaaggcaccactgactac
aaatctggatttcattttgccttcaaccaactgttaaataagacaaatgtcccacgagcc
aactgcaacaaaataatcatgctgttcactgatggaggagaggacagagctcaggatgtc
ttcatgcaatacaactggcccaacaaaacggttcgagtattcaccttttctgtgggtcaa
cacaactatgatgtcacacccttacagtggattgcatgcacgaataaaggttactatttt
gagatccgttccatctgtgctataaggattaacacccaggagtacctagatgtgctgggg
cgccccatggttttggcaggcagtgatgctaagcaggtccagtggaccaatgtgtatcag
gatgctttgggtctcggcatggtagtaactgggactttgcctgtatttaatctgaccatg
gatggaaactcacagaatcagctgatattaggtgtcatgggagttgacgtgcatcttgat
gagataaagcgactcacaccacgttacaatctcggagccaacggctacatatttgctatt
gatccaaatggatatcttcttcttcaccctaatcttcagccaaagttggtgaacctacct
gagcctgtgacgctggacttcctggatgcagaggtggaggacagcaataaagaggagatc
cggcgacagatgattgatggaagaccaggagacatgcagattaaaactcttatcaagtca
attgatgagcaatacattgacgaggtgcacaggggttacacctggactcctatcaatggt
acagattacagtctcggtttggtattaccgccctacaatgagtactacatccaggcagac
ctaagtgatgtgatgctgcagctccagtatatgcagtcgttgctgcccagctcttttgaa
tcatcaggacatgtgtttctagctcctagggaatactgcaagcgtcttcatctttctgac
aacaacacgcagtttttgcagaacttcctctctctcatgttggacatttccccagagtct
gatgagtgtgaccaaggcctcatccataacctgattttggattctcggattattgggcag
ctggcctcacgtgtatggaagaacaaggacctcaattcgtatggcttcctggctgttttt
gcgtccacagatggaggaataacaagagtttttcccaacttggcttctgagttatgggat
gaagatcctgagcccttcaattccaattactacagacggagcctcgaccacaaaggttac
atgttcagagctccatccagaggctccatggacgaccctgcagttgcagaaaatggcaca
gtcggaattgtggttagttcagctatagaggttaatttaggaggcaaacttctcaaacct
gcagtggttggagtaaagctggacttggaagcgtgggtggacaagtttaagatcctggct
agcaacgtgtcagacaatcgacagggctcacacaagtgtggcccatccaggagttgtgag
atggattgtgaagtcaacactgatgatctcctctgctatctcatagatgatggtgggttc
ctggttatgtccaatcagagggatcattggaaaaagatcggccttttctttggcgacgtg
gatccttacctaatgcatgcactctacaacaactctatcttcactcggcgtcagtctttc
cactaccagtctgcatgtgaaccggtcagcagcagccacaccggtgcagcaccaagaggc
atctttgtgccgtccatcgctgacatcctcagcttggcctggtggacatccacactggca
tggtctgtgatgcagcagctactgtacggactggcatacaacagctggctctaccgagac
gatgttctggtggagggttttgagacaaaggagagcagctgtgtgaccatccaaagccag
ttctactttacaaacaccaccaactcgtacaacgtgctgcaggactgtggaaactgctca
cggctgttccatgcaaagcggattgaaaacaccaacctcctctttgtggtggctgagaca
ctcccctgcagctcctgtgagatagagagactgacccaggtcaggacagagttccaggag
gagaatccatgtgaggtactgagcaacgcacggtatcgcaaaggcccagcttcctgtttt
gactacagtgccttagaaaacacatcagagtgtggacgcggtcattctctgcagtcgtcc
ataggagtccttctcttcattcagcttcttctgcctgtttttcatctctga
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