Scomber japonicus (chub mackerel): 128355175
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Entry
128355175 CDS
T09718
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04145
Phagosome
sjo04540
Gap junction
sjo04814
Motor proteins
sjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128355175 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
128355175 (tubb1)
09142 Cell motility
04814 Motor proteins
128355175 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128355175 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128355175 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128355175 (tubb1)
04147 Exosome [BR:
sjo04147
]
128355175 (tubb1)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128355175 (tubb1)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128355175 (tubb1)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128355175 (tubb1)
Exosomal proteins of colorectal cancer cells
128355175 (tubb1)
Exosomal proteins of bladder cancer cells
128355175 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
128355175
NCBI-ProteinID:
XP_053171390
LinkDB
All DBs
Position
3:complement(24833134..24836667)
Genome browser
AA seq
467 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISQEHGLDCTGIYEGDCPLQLERVNVYFNEAHGGKYV
PRALLVDLEPGTMDSVRGSRIGTLFRPDNFIHGNSGAGNNWAKGHYTEGAELVDQVIDRV
RNESESCDCLQGFQLVHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSIMPSPKVSDTVV
EPYNATLSVHQLLENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVCMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYSALTVPELTQQMFDSRNMM
TACDPRRGRYLTVAGMFRGKMSTKEVDEQMLAIQQRNSNHFVEWIPHNVKVAVCDIPPIG
LKMSSTFIGNNTAIQEIFRRVGEQFSMMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATAHPESEGEEEEEVAEKVQSRREVTLETVTETSQETIDE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgtacatcttcaaattggacaatgtggcaaccagatcggctcaaagttt
tgggaagtgatcagtcaagaacatgggctcgattgtaccggtatctatgagggagactgc
cccctccaactggagagggtcaacgtctacttcaatgaggcgcatggtggtaaatatgtg
cccagggccctgctggttgacctggagcctggcaccatggacagtgtaagggggagccgc
atcgggaccctttttaggccagataacttcatccatggaaactcaggagctgggaataac
tgggcgaagggtcactacaccgagggagcagagctggttgaccaggtgattgacagagtc
aggaacgagtctgaaagctgtgattgcctgcagggtttccagctggttcactcactgggg
ggtggcactggctctggcatgggaaccctcctcatcaacaagatccgagaggagtacccc
gaccgtatcatgaacaccttcagcatcatgccctcccctaaagtctctgacacggtggtt
gagccttacaacgccaccttgtcagtccaccaactcctggagaacacagatgagaccttc
tgcatcgacaatgaggccctgtacgacatctgcttccgcaccctgaaactgaccacaccg
acttacggggacctcaaccacttagtctgtatgactatgagtggggtcacaacctccttg
agattccccggacagctcaacgcagacctgaggaagctggctgtcaacatggtgcctttc
cctcgcctccatttcttcatgccaggcttcgcccccctgacagcgcggggcagccaacaa
tacagtgccctcactgtgcctgagctcacccagcagatgttcgattcccgcaacatgatg
acagcttgcgaccccagacgtgggcgctaccttacggtggctggtatgttccgtggcaag
atgtccaccaaggaggtagatgagcagatgcttgcaatccagcagagaaacagcaaccat
ttcgtggagtggatcccccataacgtcaaggttgccgtgtgtgacatcccacccattggc
ctcaaaatgtcctccaccttcatcggtaacaacacggccattcaggagatattccgtcgt
gtcggcgagcagttctccatgatgttcaggcggaaggctttcctccactggtatacaggg
gagggtatggatgaaatggagttcactgaggcagagagcaatctcaacgacctggtgtcc
gagtaccagcagtaccaagatgccactgctcaccctgaatcggaaggggaagaagaagag
gaggtggccgagaaggttcagtctcggagggaagttacactggaaacagtgactgaaacg
agtcaagagactatagatgagtag
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