Scomber japonicus (chub mackerel): 128355185
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Entry
128355185 CDS
T09718
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00510
N-Glycan biosynthesis
sjo00513
Various types of N-glycan biosynthesis
sjo01100
Metabolic pathways
sjo04141
Protein processing in endoplasmic reticulum
Module
sjo_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
128355185 (rpn1)
00513 Various types of N-glycan biosynthesis
128355185 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128355185 (rpn1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
128355185
NCBI-ProteinID:
XP_053171399
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Position
3:complement(10953467..10959108)
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AA seq
600 aa
AA seq
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MTRWSTLVGSCLLLLAAVCSEASAEGLVNEDVKRTVDLSTHLAKITAEIVLSNQGRTAVN
SFILAVEPGLAPHLAYIGASVKGDEEDDGTLEIQQTTMPGQSGEFYKVQLTSSLAAGAQL
KAKVEMTLSHVLKPFPSQITQAERQLVVFQGNHYLYSPYPTRSQTTRVRLASKTVESYTK
LGNPSKNDEIIEYGPFRDVAPFSEDTMKIHYENNTPFLTISSITRTIEVSHWGNIAVEET
VDLRHTGANLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSHLQV
LDDSVEVEVRPRFPLFGGWKTHYMIGYNLPSYEYLYTLGDQYALKMRLVDHVYDDQVIDS
MTVKIILPEGARNIHVDTPYKIDRMPNQLHYTYLDTFGRPVLVATKNNLVEQHIQDVVVH
YNFNKILMLQEPLLVVGAFYILFFTVIIYVRLDFAITKDPAAEVRMKVASITEQVLTLVN
KRLGLYRHMDEVVNRYKQSRDTGALNSGRKTLEADHRTLTNEISSLQARLKAEGSDLADK
VGEVQKLDGQVKELVCRSCQEAERLVAGKVKKEAYIESDKTLAGKRQELVSRIDSLLDAL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgactcggtggtcgacacttgtcggctcttgcctgctgctcctggccgcggtgtgctcg
gaagcttcagcggaaggtctagtgaatgaggacgtgaagaggacggtggacctgagcact
catctggccaagatcaccgcagagatcgtgctgtccaaccagggacgtaccgccgtgaac
agcttcatactggctgtggagcccggcctggccccgcacttggcatacatcggagcctct
gtgaagggtgatgaagaggatgatggcacacttgagatccagcagacaaccatgccgggc
caaagtggggagttttacaaagtgcagttgacttccagtctggcagcaggtgctcagctt
aaagcaaaggtggagatgactttaagccatgtcctgaagcctttcccctcacaaatcacc
caggctgagcgccagctggtggtctttcaaggcaaccactacttgtattccccttacccc
acccgcagtcagaccacacgtgtccgcctggcctccaagacagtagagagctacaccaag
ctgggcaaccccagcaagaacgatgagatcatcgagtatggacccttccgtgatgtcgcc
ccgttcagcgaggatacaatgaagatccattatgaaaacaacacacccttcctcaccatc
agtagcatcactcgcacaatcgaggtctctcactggggcaacatcgctgtggaagagact
gtcgatctgagacacacaggggcaaacctgaaggggcctttctcacgttatgattaccag
cgtcagtcagacagcggcatctcgtcagtcaagtccttcaagactatccttcctgcctcc
gcccaggacgtctactacagggatgaaattggcaacatctcaacctcccatctgcaggtc
cttgatgactcagtggaggtggaggtccgccctcgcttccccctgtttggaggctggaag
acccactacatgattggctacaatctgcccagctatgagtacctctacaccttgggagac
caatatgcactgaagatgagacttgttgatcacgtgtatgacgaccaagtcattgactcc
atgactgttaagatcatcctgcctgagggagccagaaacatccatgtggatacaccatac
aaaatcgatcgcatgccaaaccagctgcactatacgtacctggatacctttggccgacca
gtgcttgtcgccaccaagaacaacctggtggagcagcacattcaggatgttgtggttcat
tataacttcaataagatcctgatgctgcaggagcctctcctggttgtaggagctttttac
atcctcttcttcactgttatcatctatgttcgtctggactttgccatcacaaaggaccct
gcggccgaggtgcgtatgaaggtggcctccatcacagagcaggtgctgactcttgttaac
aagcgtctgggtctgtaccgacacatggacgaagtggtcaaccgctataagcagtcccgg
gacacgggggccctaaacagcggccggaagactctggaggccgaccaccgcactctgacg
aacgagatcagctcactgcaggcccgtcttaaagccgagggctccgacttggccgataag
gtcggggaggtgcagaagctggacggccaggtgaaggagctggtgtgtcgctcctgccag
gaggcggagcggctggtggccggcaaggtcaagaaggaggcttacatcgagagcgacaag
actctggccggaaagagacaggagctcgtcagccgcatcgacagtctgctggatgccctc
taa
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