Scomber japonicus (chub mackerel): 128355229
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Entry
128355229 CDS
T09718
Symbol
cntn4
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128355229 (cntn4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
128355229 (cntn4)
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
Contactins
128355229 (cntn4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
Others
128355229 (cntn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_C17orf99
V-set_CD47
Ig_5
Tissue_fac
C2-set_2
Pur_ac_phosph_N
C2-set
Interfer-bind
NDNF
Motif
Other DBs
NCBI-GeneID:
128355229
NCBI-ProteinID:
XP_053171452
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Position
3:complement(7974607..8099251)
Genome browser
AA seq
1126 aa
AA seq
DB search
MLIEWLEKNTDETVPGTGRILEIFECRGNGGNSQFLSAGGIPCGSNLVLWADMFLPQTRM
QMNCNRQRRYSLSQVCEVYWEAWCKVLKNENNYGVIKKLVSPFKVSCVVFPYCLTESSVL
QSPAFTKQPGSIVYPVETLEKNREVVFSCEAQGSPPPMYRWKLNGTEISAKSGSHYSLSG
GNLRISHLNKDQDAGTYQCLASNSFGTIVSREASLTFAYLENFKTHRRSSVSVREGQGVV
LLCGPPPHSGDLIFSWIFNEYPTFVKQDTRRFISQETGNLYIAKVEPSDVGNYTCVVTNT
VTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEVVHVAKGSTVKLECFALGNPVPSINW
RRADSVPFPRKVDMRKASGVLEIPYFQQEDAGTYECVAENSRGMNTVKGKLSFYAPPHLI
EKPQDVQKLIDDSVAWECKATGKPKPSYRWMKNGESLESAEERIQVGNGVLSISRLTLSD
TGMYQCVAGNKHGEVYSNAELRVIAVAPDFAHNQLRSQTLVKVGGDVLIECKPKMSPWGL
ISWRKGSEPLRESNRVSILDNGNLRIWNVTKSDASFYTCVASNQFGVASSTGSITVKEPT
IITTQPSTLDVTVGESVVLPCQVSHDPSLELKFTWFFNEQLIHFGGHGGFFEKVGGQHSA
GDIMVRNIQLRHAGKYTCAVQTKVDSISIAVDLVVRGPPGPPTSIHVEEITDTKASLSWR
PGPDNHSPITAYTIQARTPFSLGWQAVTTDPEVVGGHRLTAKVIDLSPWVEYEFRVLASN
TIGTGEPSKPSKQARTKGTLPKVTPANVSGGGGSRSELVITWEPVPEEQQNGAGFGYVVA
FRPHGATGWMQAAVPSPEASKYVFKNESIQPFSPFHVKVGVYNNEGEGPFGPVTTIYSAE
EEPGRAPTRVRAKSLSASEIEVLWKALPWNASKKRVLGYELRYWSRSEREDTASVQRTVG
NQTSTIIRGLKGSTTYYISVRAYNTAGTGPPSSTVNVTTKKPPPSQPPGKVMWNTSNSKI
ILNWEQVKALENESEVTGYKVLYKKNRHSRPNVMETNTTSVELALPTDEDYIIQIKPFGE
GGEGSSSRQITIPRIPGPNAVGSASKVSTLSALSTIALSFTARTSL
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgctaattgagtggctggaaaagaacactgatgagacggttcctggcacaggcaggatt
ttagaaatctttgaatgccggggtaatggaggaaacagccaatttctgagtgccgggggt
attccctgtggcagtaacctggtgctttgggctgacatgtttctcccacagactcgaatg
cagatgaattgtaaccgtcagaggagatacagcctgtcgcaggtgtgtgaggtctactgg
gaagcctggtgtaaagttttaaagaatgagaacaattacggtgtgataaagaagctggtg
tctccgtttaaagtcagctgtgttgtctttccttattgtcttacagagagcagtgtcctg
cagagtcctgccttcaccaagcagcctggcagcattgtgtatcctgtggagactttggag
aagaacagggaggtggtgttcagctgtgaagcccagggaagcccgcctccaatgtaccgg
tggaagctgaatggcacagaaatcagtgccaaatctggatctcactacagcctttctgga
ggcaacctcagaatcagccatctgaacaaagaccaagatgctggaacgtatcagtgcctc
gcctccaactctttcgggaccatcgtcagccgagaggccagtctaacctttgcatacttg
gaaaacttcaagacgcacagaagaagctctgtatcagtccgtgaaggtcagggagtggtt
ctgctgtgtggccctccgccacattctggagatctgatattttcctggatctttaatgag
tacccgacatttgtgaagcaggacactcgccgcttcatctcgcaggagactgggaatctg
tacattgccaaagtggagccgtcagatgtgggcaactacacctgcgtggtgaccaacacc
gtcacaaagacccgagtccagggtccacccactccactagtgctccgtagtgatggtgtg
atgggtgaatacgagccaaagattgaagttcagttcccagaggttgttcatgttgccaaa
ggatccactgtaaagctggaatgcttcgctctgggaaaccctgtgccctctataaactgg
aggagagcagacagcgttcccttccccaggaaagtggacatgaggaaagccagcggcgtc
ctggaaatcccatatttccaacaggaggatgccggcacgtacgagtgtgtggcggagaac
tccaggggaatgaacacggtgaagggaaagctctctttctacgcgcctcctcatcttatt
gagaaaccccaagatgtccaaaagctcattgatgactcggtggcgtgggaatgcaaagcc
acaggaaagccgaagccttcctacaggtggatgaaaaacggagagagcctggagtctgca
gaggagcgcatacaggttggcaacggagtgttgtcaatcagtcgcctgaccctgtcggac
acaggaatgtaccagtgtgtggccgggaataagcacggagaggtctactccaatgcagag
ctcagagttatagctgttgccccagatttcgctcacaaccaactgaggagccagacgctg
gtgaaggtaggaggagatgtgctcatcgagtgcaagcccaagatgtctccgtggggtttg
atctcgtggaggaagggcagcgaaccgctccgagaaagtaacagggtttccattctggac
aacggtaaccttcgcatatggaacgtaaccaaatctgacgcaagcttctacacctgtgtg
gcaagcaaccagtttggcgtggcgagcagcacaggaagcatcacagttaaagagccgacc
atcatcaccacccagccgtccacgctggatgtcaccgtaggggagagtgtggtcctgccc
tgtcaagtcagccacgatccatctctggagctcaagttcacctggttcttcaacgaacag
ctcatccactttgggggccacggtggattttttgaaaaagtgggcggccagcattcagca
ggggacattatggttcgaaacatccagctgaggcatgcggggaagtacacatgcgccgtg
caaaccaaggttgacagcatttccatcgctgttgacttggttgtcagaggtcccccgggc
ccccccaccagcatccacgtagaagaaatcactgataccaaagcctctctgtcctggagg
cctggtcctgataatcacagtccaattacggcatacaccatccaggccaggacaccattt
tccctcgggtggcaggctgtcaccacagatcctgaggtggtggggggccaccggctgaca
gctaaagtaatagacctgagcccctgggtggagtatgagtttcgagttctggcaagcaac
accatcgggaccggcgagcccagcaagccgtccaaacaagcaaggacaaaggggacctta
ccgaaggtcacaccagctaatgtaagcggaggcggtggcagtcgctccgaattagtcatc
acatgggagcctgttccagaggagcagcagaatggagcagggttcggctacgttgtggct
tttcgaccacacggtgccaccggctggatgcaggctgcagtcccttcccccgaggcatcc
aaatacgtttttaaaaacgagagcatccaaccattctcgcctttccacgtgaaggtcggg
gtttacaacaatgaaggggaaggccctttcggacctgttaccactatctactctgctgag
gaagagcctggccgagcgcccacaagggtccgtgccaagagcctttctgcatctgagatt
gaagttctgtggaaagctctgccctggaacgccagcaagaaacgagtactaggctatgag
ctgaggtactggagtagaagtgaaagggaagacacagccagcgtgcaaaggactgtagga
aaccaaacatcaactattatccgtgggctgaaaggcagtactacgtattacatctcagtg
agggcatataacaccgcaggaacagggccccctagctccactgtgaacgtcaccaccaag
aaaccaccacccagtcagccgccgggtaaggtgatgtggaacacatcaaactccaagata
atattgaactgggagcaggtcaaagccctggagaatgagtcagaagttactggttacaaa
gtgctatacaagaagaaccgtcatagccgcccaaacgtcatggagaccaacacgacctct
gtagagctcgccctgcctactgatgaggattatatcatccagatcaagccatttggagag
ggaggggaaggcagcagtagcaggcagatcaccatcccaaggataccaggccccaatgca
gttggctcagcatccaaggtctccactctatcagccctcagtacaatagcactgtctttc
acagcacggacatctttatga
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