Scomber japonicus (chub mackerel): 128355394
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Entry
128355394 CDS
T09718
Name
(RefSeq) uncharacterized protein LOC128355394
KO
K14525
ribonucleases P/MRP protein subunit RPP25 [EC:
3.1.26.5
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128355394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjo03009
]
128355394
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128355394
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128355394
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
128355394
Ribosome biogenesis [BR:
sjo03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
128355394
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
128355394
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
128355394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alba
Motif
Other DBs
NCBI-GeneID:
128355394
NCBI-ProteinID:
XP_053171639
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All DBs
Position
1:complement(13132149..13136102)
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AA seq
316 aa
AA seq
DB search
MFTGCGLVSGHSQYLTRDAVKPHPGLEVNRPIQMENGVTPGVTPGTCPLYQGQTYSTAGQ
LAVVNNVSSPLKPTPLPVPPPALKLGQEGFKKVCRTEEDSPCPFPGLASGVLEMRVKEGS
KIRNLMGFAMARMQGEKSVSGGGVSAAVGGGGGGGLRQVVFTGSGRAVTKTITCAEIMKR
KVGSLHQLTKLQYKVVKEVWESTEEGTSEMTVHRTVPSISILLSKDPLDPQEPGYQPPET
LGALWEEREGVSALQTACKRPLGPLPHSSFPHSDESEVSGMAWEFAISQPPDGSVFSYLE
EWVLPQFFNSPYLGIL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaggatgtggactggtcagtggccacagccaatacctgaccagagacgcagtc
aagccccaccccggactggaggtaaacagaccgatccaaatggagaatggggtaacccct
ggggtaacccctgggacctgtccgctctaccagggtcaaacatacagcactgcaggccag
ctcgcagtcgtcaataatgtttccagcccactaaaaccaacaccattacctgtccctccc
ccagcactcaaactagggcaggaagggttcaagaaggtctgtcgaactgaggaggacagc
ccctgtcccttcccaggactggcctccggggtgctggagatgcgcgtgaaggagggaagt
aagatccgcaacttaatgggatttgccatggcacggatgcagggagagaagagtgtaagt
gggggaggtgtgagtgctgctgttggtggtggtggtggtggtgggctgaggcaggtggtc
ttcacggggtcaggtcgcgctgtcacaaagaccataacctgtgctgagatcatgaaacga
aaagtcggctctctgcaccagctgaccaaactgcagtataaggtggtgaaagaggtgtgg
gagagtactgaagaggggacatcagagatgacagtgcacaggactgtgccctccatcagc
atccttctttccaaagatcccctggatcctcaggaaccaggctaccaacctccggagact
ctcggtgcattgtgggaggagagagagggtgtcagtgccttgcagacagcatgcaagaga
cctcttggacctttgccacacagcagtttccctcactcagatgagagtgaggtctctggg
atggcgtgggagttcgctatctcccagcctccagatggctccgtcttctcttatctagaa
gaatgggtgctgcctcaatttttcaactcgccttatctgggaatcctttaa
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