Scomber japonicus (chub mackerel): 128355404
Help
Entry
128355404 CDS
T09718
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128355404
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128355404
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128355404
Protein kinases [BR:
sjo01001
]
Serine/threonine kinases: Other
Other
128355404
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128355404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
LisH
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
128355404
NCBI-ProteinID:
XP_053171618
LinkDB
All DBs
Position
3:complement(36313192..36335815)
Genome browser
AA seq
1536 aa
AA seq
DB search
MAVAMAVDAKAELAKLLDEWEETQQGTTEALVSILTKISELIERETGEYHKADPDPFDDR
HPGRADPDCMLGQILKMLFRNDDFTNALLDTYIMTSRELNLNTAACRLLQNIMPGLETGV
VFQEKEGLIEKLFSWAREAERPLCVYATGLLARAMSNQEVAASYREENALLVPVMIQRLC
ELQSEGSQSHSGPTETPQNLPQDSQVEGTRTSNTSTEKTEEEEEEGESSRKASKTAAAAA
AAAGTGSGGSARLIPDFVYQASPDVPSRETEGGRGGGGGGGGGGGGGKRQVVKENGRKAK
QKLNFTSSSSCRAEDEEEEEEEVQRTSQQANSTPWSEMSSMVIGSDYRLLPLSPAMEQRL
ILQYLTPLGDYQELLAVFMQLDTRVLLMNYIDLRRTKDVQLIFDALLYLASLLLHKKFAA
EFIAHGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCTLSDGVLSDMVSYALWLL
ESSHASGVCHATMFFSISFSFRAVLQLFDQQDGLRRLINLVSTLEILNMENEVSIMSDDQ
VFSSRQTAKHTCMALRRYFEAHLSVKAEQVKQSLQSDGGSVVAQQPFYKAYAYTREQVVE
VMEFLIECGPQLHWEPVEVFCKLSCVHLMLQLISAACDWRTYYGRSDTVRYALDILAILT
VVPKVQLVLADTVEVRDETRSAVSTVGMSIIFGVAEGEVFVNDAEIQKSALQVIINCVCA
PDQSLNTVGAFAVTPIRPSMHPQQPPTPHNRVLAHMWQVVQNNNGIKVLLSLLSVKMPIT
DADLIRSLACKALVGLSRSTAIRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHIRFCRYA
AELTERVSGKPLLIGSDVSLARLQRANVVAQSRITFAEKELLMLIRNHLVAKGLNDTANT
LIKEANLSVACQNSSSCITPSSSSVIPRTCRIAGGIAARIASHHGSSPVSSITAASPSTS
RSPVLAHPSPLSSSSAPALPTPHPVPHGQGSPLVGRILFSRERSLACCSTGKRLRALKQK
SDHGAFIQTPAMKKQLERHLPSPPTLDSIITEYLREQHARCPNPVTTCPPFSLFTPHRCP
EPKQRRQASPNFTARLGSRVLYPKYEGVDRGCLDRHLIFSRFRPMSVFHEADGDESGFTC
CAFSARERFLMLGTCSGHLKLYNVFSGEETANYACHTSAITHLEPSRDGKLLLTSASWSV
PLSALWTMDSVFGMKNSFVDDHYVEFSKLSQDRVIGTKDQIAHIYDIQTGQKTLTLNDPG
LANNYKRNCATFNPTDDLVMNDGVLWDVRASRAIHKFDKFNMNISGVFHPNGLEVIINTE
IWDLRTFHLLRTVPALDQCRLVFNSNATIMYGAMLQADDEDDAMDRQMKSPFGSSFRTFD
ATDYKPIATVDVKRNIFDLCTDTKDCYLAVIENQDTVSLDTVCRLYEVGRHKLVEEGDDD
DQDDEDQDDDDSSDSDDDDDDDDDIDTDPLIEELANNNDDDDGERMNSPTEQEIAELLGG
SNSDEGNDEDEDNDDDSENSDFDDDDDDGSDIIDCK
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgccatggcagtggacgccaaggcagagctcgccaagctgctggacgaatgg
gaggagacgcagcagggaaccaccgaggctctggtctccatcctcaccaagatatcggag
ctgattgaacgggagacgggagagtatcacaaagcagaccccgacccgtttgatgatcgg
catccaggacgagcagatccagactgcatgctgggacaaatcctgaagatgctgtttagg
aacgacgactttacaaacgcgctgttggacacgtatataatgaccagcagagagctgaat
ctcaacacagccgcctgtcgtctgctgcagaacatcatgccgggtctggagacgggcgtc
gtcttccaagagaaggaaggtcttattgagaagttgttctcctgggctcgtgaagcggag
cgtccgctgtgcgtctacgctacgggtctgctggccagagccatgagcaaccaggaagtg
gcggcgagctaccgagaggagaacgctctgctcgttcccgtcatgattcagcgactctgt
gagctgcagtctgaagggtctcagagtcactcaggtcccacagaaaccccccagaaccta
cctcaggactctcaggtcgaaggcacgcggacttcaaacacctcaacggagaagacggag
gaagaggaggaggaaggagagagcagcaggaaggcgtcaaaaacggctgcagcggcggcg
gcggcggcgggtaccggcagcggcggctcggcccgactgatcccagacttcgtttaccag
gcgagcccggacgtcccctccagggagacggagggaggaagaggaggaggaggaggagga
ggaggagggggaggaggagggaagaggcaggtggtgaaggagaacgggaggaaggcgaag
cagaagctcaacttcacctcctcctcctcctgcagggctgaggatgaggaggaggaggaa
gaggaggtgcagaggacctcccagcaggccaacagcaccccctggtccgagatgagctcc
atggtgatcggctccgactaccggctgctcccgctcagcccggccatggagcagaggctc
atcctgcagtacctgactccgctgggagactaccaggagctgctggccgtcttcatgcag
ctggacactcgggtgctgctgatgaactacatcgacctgcggaggaccaaagacgtccag
ctcatcttcgacgctctcttgtatctggcctcgctgctcctccataagaagtttgcagca
gagttcatcgctcacggaggagtccagaaactcctcgagatcccgagaccttcgatggcg
gcgactggagtttctctctgcctgtactacctggcttataaccaggacgccatggagagg
gtgtgcacactgtcggacggcgtgctgtcagacatggtgtcctacgctctgtggctgctg
gagtcgtcccatgcgtcgggcgtctgccacgccaccatgttcttctccatctccttctcc
ttcagagccgtgctgcagctgtttgaccaacaggacggcctgcgcaggctcatcaacctg
gtcagtactttagagattctcaacatggaaaacgaggtttccataatgagcgatgaccag
gtgttctccagccggcagacggccaaacacacctgcatggctctgcgcaggtattttgag
gctcacctgtctgtgaaggctgagcaggtcaaacagtcgctgcagtcagacggaggaagc
gtcgtcgcccagcaacctttctacaaggcgtacgcgtacaccagagagcaggtggtggag
gtgatggagttcctcatcgagtgcggaccgcagctccactgggaacccgtggaggttttc
tgcaagttgtcctgcgttcatttaatgctgcagctcatttcagcggcctgcgactggagg
acgtactacggcaggagcgacacggtgcgttacgcgttggacatcctcgccatcctgacg
gtggttcctaaggtccagttggttctggccgacaccgtggaagtaagagatgaaaccagg
tcggctgtttccaccgtgggtatgagcatcatcttcggtgttgcagagggagaagtattc
gtcaatgatgctgagatccagaagtctgcactacaagtgataataaactgtgtgtgtgct
ccagaccagagcctgaacactgtgggggctttcgctgtgacccccatcaggccgtcgatg
cacccccagcagccccccaccccccacaacagggtgctggcccacatgtggcaggtggtg
cagaacaacaatggaataaaggttctcctgtcgctgctctcggtgaagatgccgatcaca
gacgcagacctgatccgctcgctggcctgtaaagctctggtcggactctctcgcagcaca
gccatcagacagatcatcagcaagctgccgctcttcagcagcggacacattcaacagctg
atgaaggagccggtgctgcaggacaaacggagcgagcacatccgtttctgccggtacgcc
gccgagctgacggagcgagtgtccgggaagcctctcctcatcggcagcgatgtctcattg
gctcgcctgcagagggccaacgtggtcgcccagtcgcggatcacctttgccgagaaggaa
ctcctcatgctgatcagaaaccacctggtggccaaagggctcaacgacacggccaacacg
ctcattaaagaggccaacttatccgtggcctgtcagaactcttcctcctgtatcaccccc
tcctcttcctcagtgattcccagaacctgtcggatcgccggcgggatcgcagctcgcatc
gccagccatcacggatcttctcccgtgtcctccatcacagcggcctccccgtctacctct
cgctctccggtccttgctcacccgtcgcccctgtcctcttcgtcagccccggcccttcct
actcctcacccggttcctcacggtcagggttcccctctggtcggccggattctgttctcg
cgggaacgttcgttggcctgttgcagcaccgggaaaagactgcgagcgctgaaacagaaa
tctgatcacggtgctttcatccagactccagccatgaagaagcagctggagcgccacctt
ccttcccccccgaccctggacagcatcatcacggagtacctgagggaacagcacgcccgc
tgccccaaccccgtcaccacctgcccgcccttctcgctcttcaccccccaccgctgcccc
gagcccaagcagaggaggcaggcgtcgcccaacttcacggcccgcctgggaagccgagtg
ctgtacccgaaatacgaaggcgtggaccgaggctgcctggacagacatctgatattcagc
cggtttcggccgatgtcggtgttccacgaggccgacggagacgagagcggtttcacctgt
tgtgccttctcagcccgcgagcgtttcctgatgttgggaacgtgctcgggtcacctcaaa
ctctacaacgtcttctccggagaggagacggccaactacgcctgccacacgtcagccatc
acacacctcgaaccctccagagacgggaagctgctgctgacctccgcttcttggagcgtc
ccattgtctgctctctggacgatggacagcgtctttggcatgaagaactcatttgtagac
gatcactacgtcgaattcagtaaactctctcaggacagagtcatcggcaccaaggaccaa
atcgcccacatctacgacatccagacgggccagaagaccctgaccctgaacgaccccggc
ctcgccaacaactacaagaggaactgcgccaccttcaacccgacggacgacctggtgatg
aacgacggcgtgctgtgggacgtccgggcgtcgcgcgccattcacaagttcgacaagttc
aacatgaacatcagcggagttttccacccaaacggcctcgaggtcatcatcaacacggag
atctgggacttgaggacgttccacctgctgcgcaccgtcccagcgctggaccagtgcaga
ctggtcttcaacagcaacgccaccatcatgtatggagccatgctgcaggccgatgatgaa
gatgacgcgatggatcggcagatgaagagtccgttcggttcttccttcagaacgttcgat
gccaccgactacaagccgatcgccaccgtggacgtaaagaggaacatctttgacctgtgt
accgacaccaaagactgctacctggctgtcatcgagaatcaggacacggtgagtttggac
acggtgtgccgtctgtacgaagtcggccgacacaagctggtagaggaaggagacgacgat
gatcaggacgatgaagaccaggatgacgatgattcctctgactcggacgatgatgatgac
gatgatgatgatatcgacacggacccgctcatcgaggaactggccaataacaacgatgat
gatgacggagagagaatgaactctcccacagagcaagagatcgcggaacttctcggcggc
agcaacagcgacgaaggaaacgatgaagatgaagacaacgatgatgactctgaaaactca
gattttgacgatgatgacgacgacggatccgacatcatcgactgtaagtaa
DBGET
integrated database retrieval system
