Scomber japonicus (chub mackerel): 128355408
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Entry
128355408 CDS
T09718
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128355408
04121 Ubiquitin system [BR:
sjo04121
]
128355408
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128355408
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128355408
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
DUF659
hAT-like_RNase-H
OrsD
Microp_apicomplexa
Motif
Other DBs
NCBI-GeneID:
128355408
NCBI-ProteinID:
XP_053171621
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All DBs
Position
3:complement(37172435..37181020)
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AA seq
639 aa
AA seq
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MADIAEEKEEVGKTDVAKEKDDIHTPHGSKSFVWKYFGFRKDGRKLIKDMAICRKCRWEA
RYCGNTSNLSAHLKRRHRDILGEEKAQPSTTLTTLFPQKFSNSSKRAKNISKAIAFFICR
DIRPYCVVENEGFRYLLDTLEPRYCIPSRQHFSESVIPKLYAKVRDGVIQELQKAQRVAV
TCDGWTSCTTESFITVTCHFIDHEWEMHNYVLQTRVLAETHSGVNLGHVLRAACEEWGLS
DKAPALITDNASNMKRAGEEAGMSPHIMCFAHTLNLSTQDGLKIAATDRLLGRVRRIVSF
FHRSAVATAVYKEKQKLLDLPCHKLKSDVKTRWNSSFEMLERFLEQQHAVTATLLDKKLR
KGASDIHTLTESDLTAAEQMVSLLAPLKAATTLMCEEKQPTVSIIAPLRTKLLTHFECAP
DDTPLIRDMKRAMAEDLQERYEDEEPFLHRAAALDPRFKKLPFLTDEKRNQTFECIAEEA
VQLKEQRLQNEAEAQAQKTPPRAQTCDDEWETETEEAPPASKKTKVLDDLFGDSFSTEDL
SVRKKTSKELVNDEIRKYRDIASLSLGGKVLEWWKAHQAEFPLLADLAKTYLCIPGLISS
SVSGESSAGVTSQRADSDVTTLSRDFTPGRCYSCRIHTY
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatagcagaggaaaaagaagaggtaggcaaaacagacgtggcgaaggaaaaa
gatgacatacacacccctcacggttccaagtcgtttgtgtggaagtatttcgggttccgt
aaagatggaagaaaactgattaaggatatggctatatgcagaaaatgtcgttgggaagcg
cgctactgtggcaacacatccaatctgtctgctcacctgaaaagacgccatagagatatc
ctcggcgaagaaaaagcacaaccctctacaacattgacgacactttttcctcagaagttt
tcgaacagctctaagagggcgaagaatatatccaaggcaatcgcgttcttcatatgtaga
gacatacgcccctattgcgtggtggagaacgaaggcttccgttacctgctcgacactctg
gagccgaggtattgcattccctcgcgacagcacttcagcgaatcagtgattccaaagttg
tatgccaaagttcgtgatggtgtcattcaagagttgcagaaggcacagcgcgtagctgta
acatgtgacggatggacctcctgcactacagagtcattcatcacagtaacatgccacttc
attgaccacgaatgggagatgcacaattacgtgttacagacgcgtgtgctggcggagaca
cattcaggagttaacctcggacacgtcctgcgagctgcgtgtgaagagtggggtctgagt
gacaaagcgccagccctcatcacagataatgcatccaatatgaagagggctggggaagag
gccgggatgtcaccccacatcatgtgcttcgcgcacacactcaatctgtccactcaagat
ggcctcaaaattgcagccacggacaggctgttgggtcgagttaggagaattgtgagtttt
ttccatcgcagcgcagttgccacagcagtgtacaaggaaaaacaaaaactgcttgacctc
ccgtgccacaagcttaaatcggacgtgaagacaaggtggaacagttcattcgagatgtta
gagcgattcctggaacaacagcatgcagtgacggcaacactcctggacaagaagctgagg
aaaggcgcaagcgacattcacactctcacggaaagtgacctaaccgcagcagagcaaatg
gttagcttgttggccccactgaaagctgccaccacgctcatgtgcgaagaaaagcaaccc
acagtatcaatcatcgcacccctcagaacgaaattgctgacgcatttcgaatgtgcaccg
gacgacactcccttgatcagagacatgaaacgagccatggccgaggatctccaagaacgg
tacgaagacgaggaaccattcttacaccgtgcagctgcgttggacccgaggtttaaaaag
ctcccgttcctgactgatgaaaaaagaaaccaaacctttgaatgcattgcggaggaagca
gtacaactgaaggaacagaggttacagaatgaagcagaggcccaggcccagaaaacacct
cctcgtgcccagacgtgtgatgatgaatgggaaactgagactgaagaagcacccccagct
tccaagaaaacaaaagtattggatgacttgtttggtgactccttcagcactgaggaccta
agtgtcaggaagaaaacatccaaggagcttgtcaatgatgaaattaggaagtacagagac
attgcatctctgagcctgggtggtaaggtgctagaatggtggaaagctcaccaggctgag
tttcctctcttggccgacctggccaagacctacttgtgcatacctgggttaatatccagc
agtgtgagcggggaaagttcagcaggtgtgacgagccagagagcagacagtgatgtaact
acgctgagtcgtgacttcacacctggtcgctgttacagctgcaggatacacacctactga
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