Scomber japonicus (chub mackerel): 128355478
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Entry
128355478 CDS
T09718
Symbol
si:dkey-19e4.5
Name
(RefSeq) UBA_like_SF and PTH2 domain-containing protein
KO
K04794
peptidyl-tRNA hydrolase, PTH2 family [EC:
3.1.1.29
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sjo03012
]
128355478 (si:dkey-19e4.5)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
128355478 (si:dkey-19e4.5)
Translation factors [BR:
sjo03012
]
Eukaryotic type
Release factors
128355478 (si:dkey-19e4.5)
Prokaryotic type
128355478 (si:dkey-19e4.5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTH2
UBA_7
UBA
dnstrm_HI1420
Motif
Other DBs
NCBI-GeneID:
128355478
NCBI-ProteinID:
XP_053171713
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All DBs
Position
3:4848475..4854773
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AA seq
184 aa
AA seq
DB search
MEPSEQSGPDSGSQDVNPVFLQQLRELDIPEEAAKQALLHTRNVSAEEAAMYYFNKLENE
EEGDDDLMFKMVFVVNMDLAMGVGKVAAQVGHAAVGLYQALQEKNSWREMAWKWDHSGAK
KVVVQGTNVAHLLELQALAMSLSLPTYLVQDAGLTQVEAGSRTVLAIMGEEEMVNNVTGS
LKLL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggagccatcagagcagtcgggcccagactctggctctcaggatgtcaaccctgtgttc
ctgcagcagctcagagagctggacatcccagaggaggcagccaaacaggcgctcctgcac
actcggaacgtgtctgccgaggaggcggccatgtactacttcaacaagctggagaatgag
gaggagggagacgatgacctcatgttcaagatggtgtttgtggtgaacatggacctcgcc
atgggggttggaaaggtggcagcgcaggttggccatgctgctgtaggtttgtaccaggct
ctgcaggagaagaacagctggagggagatggcctggaagtgggatcacagcggagccaag
aaggtggtggtccagggcaccaatgtggctcatctactggagctgcaggccctggccatg
agcctcagcctgcccacctatctggtccaggatgcaggccttacccaggtggaagctggg
tcccgcactgtcctggccatcatgggcgaggaggagatggtgaacaacgtcactgggagt
ctgaagctgctctga
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