Scomber japonicus (chub mackerel): 128355481
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Entry
128355481 CDS
T09718
Name
(RefSeq) uncharacterized protein LOC128355481
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128355481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128355481
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128355481
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128355481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_4
zf-RING_5
zf-C3HC4_4
Baculo_IE-1
zf-RING_10
zf-rbx1
zf-RING_11
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
128355481
NCBI-ProteinID:
XP_053171717
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All DBs
Position
3:complement(16963416..16967209)
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AA seq
498 aa
AA seq
DB search
MPRVQILSFTLGSPKEDASVATLPSSVSVPLQDEQDLMEGQSISAAVPTPGEETHTCSLP
VSHFWYVSHIYQEEIKRIEKETGVKIDADVKVTFKAGQKDGSPATALSEFINLAQKSLGE
SEGSVIPLEYTDPEEWRDTLKIIQKKENKLLLTLNSEKMIICGPRQSQDRIKKTLNTSQK
TLRNANTSVGDSTWAPQDITQTIDMTNKDPLADSGLTMEETYWKLLTTSLSGVLANIKAK
FGVHFKESDIGQGKVIVKACHKSGGNASMESHAVRALLNQYQKCATSPMSFNQDYSGSTL
NGAAKEEGATAGDNEDEKCSICLDTFTNKTQLKCKHEFCKDCLSKSVETLGPICPLCKDV
FGTVQGNQPNGKMTWTTQRTPLPGFSGCGTIVITYDMQGGTQTLIHPNPGQRYSGIRREA
YLPDNREGKEVLQLLKRAFDQKLIFTIGTSRTTGLDNQVTWNDIHHKTSMSGGQQGFGYP
DPDYLSRVREELKAKGIE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgccaagagtacaaatcctgtcttttactctgggatcaccaaaggaggatgcttcagtg
gccacacttccttcatctgtgtcagtgccactacaagatgagcaggatctaatggaggga
cagagtatttcagcagcagttcctacaccaggagaggagacacacacttgttctctccca
gttagccatttctggtatgtgagccacatctaccaggaggaaataaaacgtatagagaaa
gagactggagttaaaatcgatgcggatgttaaggtgacctttaaagcgggccagaaagat
ggaagtccagccactgctttatctgagttcattaacctcgcccagaagagtttaggtgaa
tctgagggctctgtcattcctctcgagtacacagatccagaggagtggagggacacactg
aaaataatccagaaaaaggagaacaagctcttgcttactctaaactctgaaaaaatgatc
atatgtgggccaagacaaagtcaagatcgcatcaaaaagaccttaaatacatcacagaaa
accttaagaaatgccaacacttctgttggagactcaacatgggcacctcaagacataaca
cagacaattgacatgaccaacaaagacccgctggctgattctggactaaccatggaggag
acctactggaagctgttgactacttccctcagtggggtgttagctaacatcaaagctaag
tttggcgttcattttaaagaatcagacatcggtcaaggcaaagtcatcgtcaaagcttgt
cacaaatctggaggaaatgcctccatggagagccatgctgtcagagctcttcttaatcag
taccagaagtgtgccacatctcccatgagttttaaccaagactacagtggatctacattg
aatggagcagccaaagaagagggagcaacagcaggagacaatgaagatgaaaaatgctct
atatgcttggacacatttaccaataagacacagctaaagtgtaaacatgaattttgtaag
gattgcctgtcaaagtcagtggaaaccttgggacccatctgtcctctctgcaaagatgtc
tttggaacagtacagggaaaccagcctaatggaaaaatgacatggacgacacagcgcaca
cctctccctggattttcaggctgcggcactatagtcatcacctatgatatgcaaggtgga
acacagacgttaattcatcctaatcctggacagaggtattctggtattaggagagaagca
tatcttccagacaacagggaaggaaaagaagtgctgcagctgttgaagagagcgttcgat
cagaagcttattttcactattgggacatccagaaccactgggctggacaaccaggtgacc
tggaacgacattcaccacaagacctcaatgtcaggaggacaacagggttttgggtatcct
gaccctgactatctcagcagagtccgggaggagctgaaggctaaaggcatcgagtga
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