Scomber japonicus (chub mackerel): 128355510
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Entry
128355510 CDS
T09718
Name
(RefSeq) protein transport protein Sec61 subunit alpha-like 1
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03060
Protein export
sjo04141
Protein processing in endoplasmic reticulum
sjo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
128355510
04141 Protein processing in endoplasmic reticulum
128355510
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128355510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128355510
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sjo02044
]
128355510
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
128355510
Secretion system [BR:
sjo02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
128355510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
DUF2975
Motif
Other DBs
NCBI-GeneID:
128355510
NCBI-ProteinID:
XP_053171754
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Position
3:complement(17973925..17979955)
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AA seq
476 aa
AA seq
DB search
MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS
LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP
NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN
LYVISQMLSTRFSGNFLVNLLGTWSDTTSGGPARAYPVGGLCYYLSPPESFGSVLDDPVH
ALIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA
AAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcaaattcctggaagtaataaagccattctgtgcagtgctgccagaaattcaa
aaacctgaaagaaagatccagttcagggagaaggtgctatggacagctatcactcttttc
atcttcctggtgtgttgccagatcccactgtttggcatcatgtcctcagactctgcagat
ccattctactggatgagagtgattctggcctccaacagaggtactctgatggagctgggt
atctcgcctattgtcacctcaggcctgatcatgcagttgctggctggagctaagatcatt
gaagttggagacacaccaaaggacagagccctcttcaacggagctcagaaattgtttgga
atgatcatcaccattggtcaggccatcgtttatgtgatgactggcatgtatggagatccg
tcagagatgggtgctggaatctgtcttctcatcatcattcagctgtttgtggccggactg
atcgtgctgctgctggatgagttgctccaaaagggctatggtctcggttcaggaatctca
ctgttcattgcaaccaacatctgcgagacaattgtctggaaggctttcagcccaacgact
gtgaacactggcagaggaacggagtttgaaggcgcaatcattgctcttttccatctgctg
gctacaaggacagacaaagtgcgtgctctgagagaggccttctacagacagaacctaccc
aacctcatgaatctcatcgccacagtattcgtctttgctgtagtgatatactttcaggga
ttcagggtggatctgcccatcaagtcagctcgctaccgtgggcagtacaacacctacccc
atcaaactcttctacacctccaacattcccatcatcttgcagtctgctttggtctccaac
ttgtatgttatctcccagatgctttccacacgtttcagtggcaatttcctggtgaatctg
ctcggaacttggtctgacacaacatctggtggtccagcccgtgcctaccctgtgggtgga
ctctgttactacctctctcctcctgagtcatttgggtccgttctagatgacccggtccat
gccctcatctatattgtcttcatgctcggatcatgtgcctttttctccaaaacttggatt
gaagtttcaggctcttctgctaaagatgtggcgaaacagctgaaggagcaacagatggtg
atgaggggacacagagaaacctcaatggtccatgaactgaacaggtacattcccactgct
gctgcttttggcggactgtgtatcggtggtttatcagtgatggctgacttccttggagcc
attggctctggcaccggtatcctgctggctgttaccatcatctatcagtactttgagatc
tttgtcaaagaacagagcgaagtaggcagcatgggggccctactcttctag
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