Scomber japonicus (chub mackerel): 128355531
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Entry
128355531 CDS
T09718
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128355531 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128355531 (nelfcd)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
128355531 (nelfcd)
BRITE hierarchy
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
128355531
NCBI-ProteinID:
XP_053171795
LinkDB
All DBs
Position
3:complement(16328144..16334263)
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AA seq
579 aa
AA seq
DB search
MDEEYYGGAGDWEGPDSNMEDGYVEGENDGKIQEDCLQKFSSRDYIMEPAIFNTLKMYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILSQE
EQGGSAVRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELSTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQME
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMIN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagagtactatggcggcgctggagactgggagggcccggacagtaacatggag
gatggatacgtggaaggagaaaatgatgggaaaatccaggaagactgtctgcagaaattc
tccagcagggactacatcatggagcctgcgatcttcaacaccctcaaaatgtatttccag
gcaggtggctctccagaacacgtcatccagcttctctctgaaaactactcggctgtggct
cagaccgtcaacctgctggcagagtggctcatccagatgggtgtagagcccgctcaggtc
caagagcgggtagaaaatcacctcaagagtctcctgataaaacactttgacccccagaaa
gctgactcgattttcacggttgagggagagactcctgcatggctggagcagatgatagca
cacactacatggagagatctcttctacaagctggccgaggctcatcccgactgcctgatg
ctcaacttcactgtaaagctgatttcagacgcaggttaccagggcgagatcaccagcgtg
tctacggcgtgtcagcagctggaggtcttctcccgggtgctgaggacatctctggctacg
ctcctggatggaggagaagaaaacctggagaagaacctgccagagtttgctaaaatggtg
tgtcacggcgagcacacctacctctttgcccaggcgatgatgtccatcctttctcaggag
gagcagggcggctcagctgtgcgtaggatcggtcaggaggtgcagaagtcggcacatgag
agaggtcatgatgccagtcagatcactcttgcactcggcacagcagcggcctacccccga
gcctgccaggcactgggtgccatgttgtccaaaggagccctgaatcctgcagacatcacc
gttctgttcaagatgttcagcagtatggaccctcctcctgtggagctgatcagagtgcct
gcttttctggacctgttcatgcagtcactgtttaagcccggatcaaagatcaaccaagac
cataaacacaaatacatccacatcctggcctacgctgccagtgttgttgagacatggaaa
aagaacaaacgagtcaacatcaataaagatgagctgaagtcgacgtccaaggccatcgag
actgtacacaacctctgctgtaatgagaacaaaggtgctacagaactggtggctgaactc
agcaccctgtaccagtgcatccggttcccagtggttgccatgggggttttgaagtgggtg
gactggacagtgtctgagccgcggtacttccagctgcagaccgaccacactccggttcat
ttagctctgctggatgagatctgtacgtgtcaccagctgctgcatcctcaggtcctccag
ctgctcatcaagctctttgagacagagcactctcaactagacgtcatggagcagatggag
ttgaagaagactctgctggaccgaatggttcatctcctgagccgtggctacgtcttgcct
gtagtcggttacattcgcaaatgtctggagaaactcaacacggacatctccctcattaga
tactttgtcactgaggttttggatgtgattgcgcctccctacacatcagacttcgttcag
ctcttccttcccatcctggagaacgacagcatcgcaggaaccatccgcacggagggagaa
cacgaccctgtcgctgagttcattgctcactgcaagtcaaacttcatcatgatcaactga
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