Scomber japonicus (chub mackerel): 128355560
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Entry
128355560 CDS
T09718
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128355560 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128355560 (usp48)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128355560 (usp48)
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128355560 (usp48)
Ubiquitin system [BR:
sjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128355560 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
128355560
NCBI-ProteinID:
XP_053171829
LinkDB
All DBs
Position
3:3850219..3867595
Genome browser
AA seq
1052 aa
AA seq
DB search
MAPRLQLEKAAWRWVESVKPEEISQEHIELAYRVHLPACKRGTCRRNCKGNPNCLVGIGE
QAWLGEIDENAFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRSLYQC
HNSRAQEHNIESDYEPQSICEHLQYLFALLQNSNRKYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKNFSLQNVIQQQFCGQFSYVTVCNQCGRSSALPSRFYELELNIQG
HKNLTECVTEFLKEEKLDGDNRYFCESCQSKQSATRRIKLHSLPPTLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMGPFLEGKQDQKCVYELSAVLIHRGISAYSGHYIAHVKDARTS
DWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYKLQEEE
SSDPSKTIVEVPAFLQRLVDQDNHKFEEWCSEMADMRKQSVDKGKAKHEEVKELYELLPA
RDGEPYEFIPLDWLKKWLDDSTATKEIDNSSFLCSHGKLHPDKVGDSKRVSLQAGQLLYE
RYGGGPRLDGSSLCRECVGQRCRVLRLKNQLNEDYKEVTNLVKRTLSGEGYWVGKASLRS
WRQLALEQLEEDEHESKHSNGQTNGQGPHSNNCKEFGPELSEGNEEEMKTFNEDIVCSHG
GLSILETERKLVSSEVWTKLRVYFPKAPEFTQAQEQCQQCVTLEQEEKDNEAVSKMMALD
QKNQLLNLFNEKNRPTLTKWPQDTDVLYIVPLFFVDEWRKFIRRPTKSSPVSNVGNSLLL
CPHGGFMFTYDSLISGDAQHIALLWPSEWDVISRLFIVDQPISIHCFKQTTPTGPTTQYT
TQPDLCWECREGFLFQQQRDLREYTQATIYIRKVIEDKRMIKEAAPELNASSSEAEEEKE
EHPKVEGERDPDFTQSQDGAKRLKLSDDNTAAEAATVVPVTNVTKLGGIRRSTRHRKLRG
EKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKNLTDDSATLGSLGVIPESIICLK
ADEPIADYAAMDDVYQVRMPEEGFKGTGLLGH
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccgcttacagttggagaaagcggcttggcgttgggtggaaagtgtgaaacca
gaggaaatcagccaggagcacatcgaactagcataccgcgtccatctcccggcctgcaag
agaggaacctgcaggaggaactgcaaagggaatcccaactgtcttgtgggaattggtgaa
caggcgtggcttggggagattgatgaaaatgctttccataatatcgatgacccaaattca
gaacgtagagacaagaacacatttgtcggcctgaccaacctgggtgcgacatgttacgtt
aacacattcctccaagtgtggttccacaaccttgagctgcgaaggagcctctatcagtgc
cacaattccagagcacaggaacacaacattgagtctgattatgagcctcagtccatctgt
gagcatctccagtatctgtttgcactcctgcagaacagcaatagaaaatacatcgacccg
tcaggattggtcaaagcactgggcctggacacaggacagcaacaggatgcccaggagttt
tcaaagctcttcttgtctctactggaggacacgctgtccaagcagaagaacttcagcctg
cagaacgtcatccagcagcagttctgtggacagttctcctacgtgactgtgtgtaaccag
tgtggacgatcctctgcactgccgtccagattctacgaactggaactgaacatccagggc
cacaagaacctcacagagtgtgtcacagagttcctgaaggaggagaagctggatggggac
aaccgctacttctgcgagagctgtcagagtaaacagagcgccacccgcaggatcaaactg
catagtctcccccctacactcaacctgcagctcatgcgctttgtcttcgacagacaaaca
ggccacaagaagaagctcaacactttcatcagttttccagagcagctggacatggggcct
tttttggaagggaaacaagaccagaagtgtgtttacgaactgagtgcagtgctgattcat
cgaggcatcagcgcttactcgggacactacatcgcccacgtgaaagatgctcgaaccagc
gactggtacaagttcaacgatgaggaaatcgagaagatggaaggcaagaagctgcagctg
ggcattgaggaggacattgcggaaacagtgaagtctcagacacgaaagcctaagtgcagt
aaaggctaccactgctccagaaatgcctacatgctggtgtataagctccaagaagaggag
agctcagatccttccaagactatagtcgaggtgccagccttcctccagaggttggtggac
caagacaaccataaatttgaggagtggtgcagtgaaatggccgacatgaggaaacagagc
gtggataaaggcaaggccaagcacgaggaggtgaaggagctctacgagctattacctgca
agagacggtgagccgtatgagttcatacctctggactggttgaagaagtggctggacgac
tccaccgccacaaaggaaatcgacaactcctccttcctgtgttctcatggcaaactgcat
ccagacaaggtgggagattccaagagggtttccctgcaggccggtcagctcctgtatgag
cgctatggtggaggtccaagactggatggctcctctctgtgtagagagtgtgttggccag
agatgcagggtgctgcggctgaagaaccagctcaatgaggactacaaggaggtcaccaat
ctggtcaaacgcacactcagtggtgagggctactgggtgggtaaagcatctctgcgtagc
tggaggcagttagctcttgagcagctggaggaggatgaacatgagagcaaacacagcaac
ggccagaccaacggacagggaccacacagcaacaactgcaaagagttcggcccggagctc
tccgagggcaatgaggaggagatgaagactttcaatgaggatatagtctgcagtcacgga
ggtctgagtattctggagactgaacggaagctggtttcctctgaagtttggaccaagctg
agggtgtactttcccaaagccccagaatttactcaagcccaagaacaatgtcagcagtgc
gtgacattagagcaggaagaaaaggacaacgaggctgtcagtaagatgatggctctggac
cagaagaaccagctgctcaacctcttcaatgagaagaaccggccaacactcaccaagtgg
cctcaggacacagatgtgctttacatcgtccctctgttttttgtggatgaatggagaaaa
ttcatcaggaggcctactaaatcttctccagtgtctaatgtgggcaacagcctgcttctc
tgtccccatggaggcttcatgttcacctacgactccctgatcagcggagatgcacaacat
atagctctgctatggcccagcgaatgggatgtgatcagcagactcttcattgtggatcag
ccaatctccatccactgcttcaaacagaccacgcctactggtcccaccacccagtacacc
acccagcctgatctatgttgggagtgcagagagggcttccttttccagcagcagagggac
ctcagagagtacacccaagccaccatttacatccgcaaagtcatcgaagataagaggatg
ataaaagaagcagctccagagctgaatgccagcagctccgaggcagaggaagagaaggaa
gaacacccaaaggtggaaggagagagagacccagacttcacccagtcccaagatggtgca
aagcggcttaagttgagtgatgacaacactgcagcagaagcagcaacagttgttcctgta
accaatgtgaccaaactgggtggaatcaggagaagcacccggcacaggaagctcagagga
gagaaagcactcatcgtttcagccaatcagacccttaaagaactgaaaatccaaattatg
cacgccttttctgtggctccttttgaccagaacctctccattgatggaaaaaatctgacc
gacgactcagccacactgggcagcctgggtgtcatcccagagagcatcatctgtctaaag
gctgatgagccaatagcagactacgctgcaatggatgatgtctatcaggtgagaatgcct
gaagagggattcaaaggcactgggcttcttgggcactga
DBGET
integrated database retrieval system
