Scomber japonicus (chub mackerel): 128355570
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Entry
128355570 CDS
T09718
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00260
Glycine, serine and threonine metabolism
sjo00630
Glyoxylate and dicarboxylate metabolism
sjo00670
One carbon pool by folate
sjo01100
Metabolic pathways
sjo01200
Carbon metabolism
sjo01230
Biosynthesis of amino acids
sjo01240
Biosynthesis of cofactors
sjo04981
Folate transport and metabolism
Module
sjo_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128355570 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128355570 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128355570 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128355570 (shmt2)
Enzymes [BR:
sjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128355570 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Flavi_NS5
Motif
Other DBs
NCBI-GeneID:
128355570
NCBI-ProteinID:
XP_053171846
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Position
3:24575720..24600197
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AA seq
501 aa
AA seq
DB search
MLSFALRQVTRPLCQRAPVRLCVRGQQSHAATRAVDEDRSWTGQESLAQDDPEMWDLLQR
EKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALEAFDLDPAQWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNTATGLIDYDQMELTAKLFRPKLIIAGTSAYARLIDYARIKKLCT
DIKAYLLADMAHISGLVAARAIPSPFEHADLVTSTTHKSLRGARAGLIFYRKGVRSVDKK
GKEIMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQAQSPMFKEYIAQVLKNSKSMAT
ALLSKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEADFVQVVEFMDEGFKIALDVKKKTGKLQDFKNFLLQDPETVARIA
DLRHRVEGFARPFPMPGFHDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgctctgagacaagtcacccggccactgtgccaacgagccccggttcgt
ctttgtgtccgtgggcagcagtcccacgctgccacccgtgcagtggatgaagatcgttcg
tggacgggccaggaaagcttggctcaggatgacccagagatgtgggatctgctgcagagg
gagaaggacaggcagtgccgcggtttggagcttattgcatctgagaatttttgcagtcga
gccgctctggaagctctgggctcctgtctaaacaacaaatactccgaaggctacccggga
agaaggtactatggtggagcagaagtggtcgaccaaatcgagttactgtgtcagaagcga
gccttggaggcttttgacctggacccagctcagtggggtgtcaatgtccagccatactct
ggctcccctgctaacttcgcagtctacaccgccgtgctcaacccccatgatcgtatcatg
ggcctggacctgcccgacggaggacatctgacccatggctacatgtctgatgtgaagagg
atctcagcaacctcaatctattttgagtccatgccctacaagctcaatactgcaacagga
ctcatagactacgaccagatggagttgacggccaagctgttcaggcccaagctcatcatc
gctggcaccagtgcctatgcccggctcattgactacgcccgcatcaagaagctatgtact
gacattaaggcctacttgctagctgacatggcccatatcagtggcttggtggcagccaga
gctattccctctccctttgaacacgctgacctggtcacttctaccacacacaaatccctc
agaggagccagggctggtctcatcttctatcgtaaaggtgtgcgctctgtggacaagaag
gggaaggaaatcatgtacgacctcgaggacaaggtcaacttctctgtcttcccctccctg
cagggtggacctcataaccatgccatcgctggtgtggctgtggcactgagacaggcacag
tctcccatgttcaaggagtatatcgcccaggtactaaagaactccaagtccatggctaca
gctcttctcagcaaaggctacaccctggtatcaggagggaccgaaaaccacctggtcctg
gtggaccttcggcctaagggcattgacggggctcgggctgaaagggtgctggagcttgta
tcaatcactgccaataagaacacctgccctggggacaagagtgccctgactcctggtggt
ctcaggctaggcgctccagctctgacctccaggcagttcaaagaagcagactttgtgcaa
gttgttgaattcatggatgagggctttaagattgccttggatgtaaagaaaaagacagga
aagctccaggacttcaagaacttcctacttcaagaccctgagactgtggcccgtatcgcc
gacctgcgccaccgcgtcgaaggttttgccagacctttccccatgccaggcttccatgac
cattag
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