Scomber japonicus (chub mackerel): 128355581
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Entry
128355581 CDS
T09718
Symbol
top1a
Name
(RefSeq) DNA topoisomerase I, like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjo03032
]
128355581 (top1a)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
128355581 (top1a)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Topoisomerases
128355581 (top1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
128355581
NCBI-ProteinID:
XP_053171860
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Position
3:11887721..11897574
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AA seq
753 aa
AA seq
DB search
MSGDHSHNEEQIDCGSRVNDSHKHKDKYKDKEHKHKDHKKDKERDRLKHGNSDHKDSSDK
KHRDKEKMKHKDGSTDKYKDKHKEKRKEEKMKSLDGKIKKEKENGFASPPHVKSEPEDDF
YHSPKHERSLKRERDDDNDSEFKPKKIKTENEKKAKKRKQDEDIKSKKTKGKKGEVADGK
KKGKKEPEEKWKWWEEERYTDGVKWKFLEHKGPVFAPPYDPLPNNVKFYYDGKTMKLSPE
AEEVATFFAKMLDHEYTTKDIFRKNFFKDWRKEMSAEEKTKITDLKKCNFAEMSEYFKAQ
SEARKAKSKEEKLKIKEENERLLQEYGFCIMDNHKERIANFRIEPPGLFRGRGDHPKMGM
LKRRIRPKDIIVNCSKDSKHPEPPPGTKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPS
SRIKGEKDWQKYETARRLKKCVDRIRSQYHEDWKSKEMRIRQRAVALYFIDKLALRAGNE
KEEGETADTVGCCSLRVEHIKLYPEKDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQ
LFMENKEPDDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASITLQQQLKQLTSADENI
PAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDAKRDQLSDAKRELKSAKADA
KVRRDEKSKKAVETKKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW
CKKWDIPIEKIYNKTQREKFAWAIDMADEDYEF
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggaccattcccacaacgaggagcagattgactgtggctctcgggtcaatgac
tctcacaagcataaagacaagtataaggacaaggaacacaaacataaggaccacaagaag
gataaggaacgggatagattgaagcatggcaacagcgaccacaaggactcctctgacaaa
aaacatagagacaaggaaaagatgaagcacaaagatggtagcacagacaaatacaaggac
aagcacaaggagaagaggaaggaggagaagatgaagtcccttgatggtaaaattaaaaag
gaaaaagagaatggctttgccagcccaccacatgtgaagtctgagcctgaggacgacttt
taccactcccctaaacatgaaaggtctctaaagagagaacgagatgatgataatgactct
gaattcaagcccaagaaaataaagactgaaaatgaaaagaaggctaagaaaaggaaacaa
gatgaggacattaagtccaaaaagacaaaaggcaaaaaaggagaagtcgctgatggaaaa
aagaaaggaaaaaaagagccagaggagaagtggaaatggtgggaagaggagagatacaca
gacggcgtcaaatggaaatttctggagcacaaagggccggtgtttgcgccaccttatgat
cctcttcccaacaatgtcaaattttactatgatggtaaaactatgaagctcagtccagag
gcagaagaggtcgctacgttctttgcaaaaatgcttgaccatgagtacaccacaaaggat
atcttccgtaaaaacttcttcaaagactggaggaaggaaatgagcgcagaggaaaagacg
aagatcaccgacctgaagaaatgcaactttgctgaaatgagcgaatattttaaggcgcag
tccgaagccaggaaggccaagtcaaaagaggagaaactgaaaataaaagaagagaacgag
cgtctcttgcaggagtatggtttctgcatcatggacaaccacaaggaacgtattgctaac
ttccgcattgagcctccaggtcttttccgtggtcgtggagaccatcccaagatgggcatg
ctcaaacgacgcatcaggcctaaagacatcatcgtcaactgcagcaaggactccaagcac
cccgagcctcctccaggcactaagtggaaagaggttcgtcatgacaacaaggtgacttgg
ttggtgtcgtggacggagaacattcaaggctccattaagtacatcatgctgaaccccagc
tctaggatcaagggagagaaggattggcagaagtacgaaactgcccgcagactgaaaaaa
tgtgtggaccgcatcaggagccagtaccacgaagactggaagtccaaggagatgaggatc
agacagagggccgtggcgctctacttcattgacaagctggctctgagagcaggtaacgag
aaggaggaaggagagaccgcggacacggtgggctgctgctccctgagagtcgaacacatc
aaactctacccagagaaggatggtcaagagtacgtggtggagtttgacttcctgggtaaa
gactccatccgctactacaacaaagtcccagtggagaaaagggtatttaagaatcttcag
ttgtttatggagaacaaggagcctgatgatgacctgtttgatcgcctgaatacttctatt
ctcaacaagcatcttcaggagctgatggacggtctgacagccaaagttttccgtacctac
aacgcctcaatcaccctgcaacagcagttgaagcagctcacaagtgcggatgaaaacatt
ccagccaagatcctgtcctacaacagggccaacagggctgtggccatcctgtgtaaccat
cagagggctccaccgaagacatttgagaagtctatgcagaacctgcagactaagattgat
gctaaaagggaccagctttctgatgccaagagagaactgaagagcgccaaggctgacgcc
aaagtacgcagagatgaaaaatccaaaaaggctgtggagactaagaagaaggcggtgcag
aggatagaggagcagctgatgaagctggaagtgcaggcgactgatcgtgaagagaacaag
cagattgcccttggcacttccaagctcaactatctggaccctcgcatctctgtggcttgg
tgcaagaagtgggacattcccatcgagaagatctacaacaaaactcagcgtgagaagttt
gcctgggccatcgacatggcagatgaggactatgaattttaa
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