Scomber japonicus (chub mackerel): 128355605
Help
Entry
128355605 CDS
T09718
Symbol
sdc4
Name
(RefSeq) syndecan-4 isoform X1
KO
K16338
syndecan 4
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04512
ECM-receptor interaction
sjo04514
Cell adhesion molecule (CAM) interaction
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128355605 (sdc4)
04514 Cell adhesion molecule (CAM) interaction
128355605 (sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128355605 (sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sjo00535
]
128355605 (sdc4)
Proteoglycans [BR:
sjo00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
128355605 (sdc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
128355605
NCBI-ProteinID:
XP_053171888
LinkDB
All DBs
Position
3:complement(37145175..37167773)
Genome browser
AA seq
217 aa
AA seq
DB search
MLHLCCLVLLLSASVFSESQVRETETWMPMKTTQTAALSTRDVESSGDAQNGSDFGFTDD
GEDDEDYYDSYDDDDEDEEYDEFSGSGDGAATETPERDIRPSEKPDSNSNKIPDVERPAR
PTVNELDAVNGNEIPLLRNEPEQEYPPNVLMSHAGEGSIFNKTEVLAAVIAGCAVGLMFA
VLLTLFLIYRMKKKDEGSYDLGKKPIYKKAPTTEIYA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacctctgctgcctcgtgctgcttttatctgcctctgtcttctcagagtcgcag
gtgagggagacggagacgtggatgcccatgaagaccacacagaccgccgccttgtcgacg
cgcgacgtcgagtcttcgggagacgctcagaacggctccgacttcggcttcacggacgac
ggtgaagacgacgaagattattacgactcgtacgacgatgacgatgaggacgaggagtac
gacgagttctccggatctggggacggagcagcgactgagactcctgaacgagacatcagg
ccgtcagagaagcccgactcaaactccaacaagatccccgatgtggagcgtccggcgcgg
cccaccgtcaacgagctggacgccgttaacggtaacgagattcctctgctgaggaacgag
ccggagcaggagtacccgcccaacgtgctcatgtctcacgctggagagggaagcatcttc
aacaagaccgaggtcctcgcagctgtgatcgcgggctgcgccgtcggcctgatgttcgcc
gtcctgctcacgctcttcctcatctaccgcatgaagaagaaggatgagggaagctacgat
ttggggaagaagccgatctacaagaaagcgccaaccacagagatctacgcatag
DBGET
integrated database retrieval system