KEGG   Scomber japonicus (chub mackerel): 128355605
Entry
128355605         CDS       T09718                                 
Symbol
sdc4
Name
(RefSeq) syndecan-4 isoform X1
  KO
K16338  syndecan 4
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04512  ECM-receptor interaction
sjo04514  Cell adhesion molecule (CAM) interaction
sjo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128355605 (sdc4)
   04514 Cell adhesion molecule (CAM) interaction
    128355605 (sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128355605 (sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:sjo00535]
    128355605 (sdc4)
Proteoglycans [BR:sjo00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   128355605 (sdc4)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 128355605
NCBI-ProteinID: XP_053171888
LinkDB
Position
3:complement(37145175..37167773)
AA seq 217 aa
MLHLCCLVLLLSASVFSESQVRETETWMPMKTTQTAALSTRDVESSGDAQNGSDFGFTDD
GEDDEDYYDSYDDDDEDEEYDEFSGSGDGAATETPERDIRPSEKPDSNSNKIPDVERPAR
PTVNELDAVNGNEIPLLRNEPEQEYPPNVLMSHAGEGSIFNKTEVLAAVIAGCAVGLMFA
VLLTLFLIYRMKKKDEGSYDLGKKPIYKKAPTTEIYA
NT seq 654 nt   +upstreamnt  +downstreamnt
atgctgcacctctgctgcctcgtgctgcttttatctgcctctgtcttctcagagtcgcag
gtgagggagacggagacgtggatgcccatgaagaccacacagaccgccgccttgtcgacg
cgcgacgtcgagtcttcgggagacgctcagaacggctccgacttcggcttcacggacgac
ggtgaagacgacgaagattattacgactcgtacgacgatgacgatgaggacgaggagtac
gacgagttctccggatctggggacggagcagcgactgagactcctgaacgagacatcagg
ccgtcagagaagcccgactcaaactccaacaagatccccgatgtggagcgtccggcgcgg
cccaccgtcaacgagctggacgccgttaacggtaacgagattcctctgctgaggaacgag
ccggagcaggagtacccgcccaacgtgctcatgtctcacgctggagagggaagcatcttc
aacaagaccgaggtcctcgcagctgtgatcgcgggctgcgccgtcggcctgatgttcgcc
gtcctgctcacgctcttcctcatctaccgcatgaagaagaaggatgagggaagctacgat
ttggggaagaagccgatctacaagaaagcgccaaccacagagatctacgcatag

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